Winogradskyella sp. PG-2: WPG_0009
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Entry
WPG_0009 CDS
T03603
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
win
Winogradskyella sp. PG-2
Pathway
win00300
Lysine biosynthesis
win00470
D-Amino acid metabolism
win01100
Metabolic pathways
win01110
Biosynthesis of secondary metabolites
win01120
Microbial metabolism in diverse environments
win01230
Biosynthesis of amino acids
Module
win_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
win00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WPG_0009
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WPG_0009
Enzymes [BR:
win01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WPG_0009
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
RNaseT2L_C
Motif
Other DBs
NCBI-ProteinID:
BAO74239
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Position
complement(7440..8219)
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AA seq
259 aa
AA seq
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MRITFYKYQGTGNDFIIVDNRSHIIDKNNTKRIEQLCDRRFGIGADGFILLENDENSDFK
MVYYNADGNESSMCGNGGRCITAFAKFLGVIENETEFLAIDGLHKAKIENDIVHLQMQDV
STVETYESHSFLDTGSPHHVELVSDIDNFNVKIKGCTIRYGKAYMTGGTNVNFVEQLAED
SFAVRTYERGVENETLSCGTGVTAVALAMHKTGKTDSSTVSLKTPGGQLKVNFQSHENGY
NDIWLVGPATQVFKGELEW
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagaataacattttataaatatcaaggtacaggaaacgactttattattgttgataat
cgctcacatataatcgacaaaaataataccaaacgaatagagcaattgtgcgatagacga
tttggtattggagctgatggatttatactattagaaaatgacgaaaattcagattttaag
atggtatattataatgcagatggtaatgaaagtagtatgtgtggtaatggaggacgatgt
attacagctttcgcaaagtttcttggagttatagaaaatgaaacagagtttttggctata
gatggtctacataaagccaaaattgaaaacgatattgttcacttacaaatgcaagatgtt
tccacagtagaaacatatgagagtcattcatttttggatacaggttctcctcatcacgta
gaattagtttcagatatagacaattttaatgtgaaaataaaaggatgtactataagatat
ggtaaagcttatatgactggtggaactaatgttaattttgttgagcaattagctgaagat
agttttgctgtaagaacctatgaacgaggagttgagaatgaaacattatcttgcggaaca
ggtgtgactgctgttgctttggctatgcataaaactggcaaaacagatagtagtactgtt
agtctgaaaacaccaggaggtcaattaaaagtgaattttcagagtcatgaaaatggatat
aatgatatttggttagtaggaccagcaactcaagtttttaaaggtgaattagaatggtaa
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