Winogradskyella sp. PG-2: WPG_1542
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Entry
WPG_1542 CDS
T03603
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
win
Winogradskyella sp. PG-2
Pathway
win03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
win00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WPG_1542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
win03400
]
WPG_1542
DNA repair and recombination proteins [BR:
win03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WPG_1542
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WPG_1542
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF2711
ZW10_C2
Motif
Other DBs
NCBI-ProteinID:
BAO75772
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Position
1687360..1688079
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AA seq
239 aa
AA seq
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MLTKNNSIVLSKLKYRDYDLIVKCYTQQRGVVSYLLRGVLKSKKGKTKTVYFQALSQLQI
DENYKPNQSLHSIKEVKLNYIYKSLHTNIYKSAIVLFLSEVLSNVLKEEEKNEDLFNYIE
TALQYLDNENQFSNFHLLFLLKLTRYLGFQPENLNSNYPFFNLKSGVFEATNNGIYSISG
ENLTLLKRLLGINFDALSFVKINAKQRQEFLNMLLYYFELHLGGFKKPKSLQVLNDVFH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaaaaataatagcatcgttctttcaaaattaaaatatagagactacgacctc
attgtaaaatgctatacacaacaaagaggtgtggttagttatcttttaagaggagtactg
aaatctaaaaaaggaaagactaaaacggtttattttcaggcactgtctcagcttcaaata
gacgaaaattataagccaaaccaatcacttcattcaataaaagaagtaaagcttaattat
atatataagagtcttcatacaaatatctataagagcgctattgttctatttttgtccgaa
gtgttgtctaatgtacttaaggaagaagaaaaaaatgaagacctgtttaattatatcgaa
acagctttacaatatttagataatgaaaatcaattttcaaattttcatttattatttctc
ttaaaattaacaagatacctagggtttcagccagaaaatttaaacagtaattatccattt
ttcaatcttaagtctggtgtttttgaagccactaataatggaatttactcaatttcagga
gaaaatttaacactgttaaaacgcttgttgggtataaattttgatgctttaagttttgta
aagattaatgcaaagcaaagacaagagtttttaaatatgttattgtattattttgaatta
catttggggggttttaaaaaacctaaatcattgcaggtgcttaacgacgtatttcattaa
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