Winogradskyella sp. PG-2: WPG_1610
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Entry
WPG_1610 CDS
T03603
Name
(GenBank) cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
win
Winogradskyella sp. PG-2
Brite
KEGG Orthology (KO) [BR:
win00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
win03019
]
WPG_1610
03009 Ribosome biogenesis [BR:
win03009
]
WPG_1610
Messenger RNA biogenesis [BR:
win03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WPG_1610
Ribosome biogenesis [BR:
win03009
]
Prokaryotic type
rRNA processing factors
WPG_1610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF6305
Phage_T4_Y12K
Motif
Other DBs
NCBI-ProteinID:
BAO75840
LinkDB
All DBs
Position
1767050..1768594
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AA seq
514 aa
AA seq
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MNKELIVRSSSDIVDFALLKDGKLIELHKDEEDNDFAVGDIFIAKIRKVMPGLNAAFVNV
GYEKDGFLHYHDLGPQLPSLMKFIKRVSTGKLRDYTLKDFPKEKDLDKHGKIAQAIKSNQ
SILVQVVKEPISTKGPRISSELSIAGRYIVLVPFSNRISISQKIESQEEKDRLKRLVKSI
TPKGFGVIIRTVAEGKKVAELDSDLQNLLSRWTAMCKKLYKAHHPTKVLGEMNKASSILR
DIFNDTFSGIVVDDEEMYIQVKDYVQQIAPKKESIVKHYKNGVPIFEKFGIERQIKTSFG
RTVSMAKGAYLVIEHTEALHVVDVNSGNRSNKEKSQEDTALEVNMISAAEIARQLRLRDM
GGIIVIDFIDMGRVENRKKLYNFLRDEMKDDKAKHKILPPSKFGLVQITRQRVRPERNIK
TKEENPNLVGGAEIEAPIKVVERINQDLQRIFKKDYKKVTLNAHPFIAAFLTKGFPSPRS
KWFFEHKKWVKVLPRDAYTYLEYHFYDKDGNKIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaattaatcgtaagatcgagttcagatattgttgattttgccttattaaaa
gatggaaaacttattgaattacataaagacgaggaggataatgactttgcggttggtgat
atttttattgccaaaatacgtaaggttatgcctggtttaaacgctgcgtttgttaacgta
gggtacgagaaagatggttttttacactatcacgatctaggaccgcaattgccttcactt
atgaaattcattaaacgtgtaagcacaggaaaattaagagattatacgctcaaagacttt
ccaaaggaaaaggatttagacaagcatggcaaaattgcgcaagcaattaagtctaaccaa
tccattttagtacaagtcgtaaaagaaccaatttccacaaaagggccacgcattagttca
gaattgtctattgctggtagatacatagtcttagtgcctttttctaatcgcatttcaatt
tctcaaaaaattgaatctcaagaagaaaaagaccgcttaaaaagactcgttaagagtatc
acacctaaaggatttggggttattattcgtactgtagctgaaggtaagaaagttgccgag
ctagatagtgatttacaaaatttgctgagtcgatggacagcaatgtgtaaaaaattgtac
aaagcacatcacccaactaaagtactaggagaaatgaataaagcatcctcaattttgaga
gatatatttaatgatactttctcaggtatagtggtagatgacgaagaaatgtacatacaa
gtaaaagattacgtgcaacaaattgcacctaaaaaagagtctatagtaaagcactataaa
aacggtgtccctatttttgaaaaatttggtatagaacgccaaattaaaacatcgtttggt
cgtacagtatctatggcaaaaggagcttatttggtaatagaacataccgaagctctacat
gttgtagatgtaaatagtggtaatcgctctaacaaagagaagagccaagaagatacggct
ttagaagttaacatgatttcagctgcggagatagctcgccaattacgtttacgtgacatg
ggaggtataattgttatcgattttatcgatatgggacgcgttgaaaacagaaaaaagctt
tataattttctcagagatgagatgaaagacgacaaagcaaaacataaaatattaccgccg
agtaagtttggtttagtgcaaattaccagacaacgcgttaggcctgagcgtaatattaaa
accaaagaagaaaaccctaatttagtaggaggagcagaaatcgaagcaccaattaaagtg
gtggaacgtattaaccaagacctacaaaggattttcaaaaaagactataagaaggtaaca
ttaaatgcacatccttttatagcagcctttttaaccaaagggtttccatcaccacgttca
aaatggttttttgaacacaaaaaatgggtaaaagttttacctagagatgcttacacttat
cttgaataccatttttatgataaagatggtaacaaaatcaaataa
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