Winogradskyella sp. PG-2: WPG_1980
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Entry
WPG_1980 CDS
T03603
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
win
Winogradskyella sp. PG-2
Pathway
win02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
win00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WPG_1980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
win03021
]
WPG_1980
Transcription machinery [BR:
win03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WPG_1980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
Motif
Other DBs
NCBI-ProteinID:
BAO76210
LinkDB
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Position
complement(2193110..2193922)
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AA seq
270 aa
AA seq
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MDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEELTKANLRFVVSVAKQYQNQGLTLP
DLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKIGSINK
INKTFAFLEQSHERPPSAEEIAKELDMTINDVKESMKNSGRHVSMDAPLVEGEDSNLYDV
LRSGESPNPDKDLLHESLRTEIERALETLTPREADVIRLYFGLGNQHPMTLEEIGETFDL
TRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttggacaaatacctacaagaaattggcaaggtagatttgattacagcagacgaagaggtt
gaattggcccaacgtattaaagctggtgatcaacgtgcattagaagaattaacaaaagct
aacctacgttttgttgtatctgttgctaaacagtatcaaaatcaagggcttacattaccc
gatttaatcaatgagggtaatttaggtttaattaaagcggctcaacgttttgatgaaaca
cgtggctttaaatttatatcttatgctgtttggtggattagacaatctattttacaagca
ttggcagaacagtctcgtatagtgcgtctacctttaaacaagataggttcaataaataaa
ataaataagacgtttgcttttttggagcaaagtcacgagcgtcctccatctgcagaagag
attgctaaagaattagatatgactattaacgatgttaaggagtccatgaaaaattctggt
cggcatgtaagtatggatgctcctttagttgaaggtgaggattctaacctatacgatgta
ttacgtagtggtgagtctccaaacccagataaagatttattacacgaatcattacgaact
gaaatagagcgtgctctagaaacacttacaccacgtgaagcagatgttatacgtttatat
tttgggttaggaaaccagcatccgatgaccttagaagaaattggtgaaacatttgattta
actagagaacgtgtaagacaaattaaagaaaaagcgattagaaggttaaaacatacctct
agaagtaaaatattgaaaacatacttaggttaa
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