Winogradskyella sp. PG-2: WPG_2106
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Entry
WPG_2106 CDS
T03603
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
win
Winogradskyella sp. PG-2
Brite
KEGG Orthology (KO) [BR:
win00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
win03032
]
WPG_2106
03400 DNA repair and recombination proteins [BR:
win03400
]
WPG_2106
Enzymes [BR:
win01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WPG_2106
DNA replication proteins [BR:
win03032
]
Prokaryotic type
DNA Topoisomerases
WPG_2106
DNA repair and recombination proteins [BR:
win03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WPG_2106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAO76336
UniProt:
A0A024FHC6
LinkDB
All DBs
Position
2315958..2318468
Genome browser
AA seq
836 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEKFLGKDYKVESSFGHIADLPSKELGVDVDGDFMPKYQVSKDK
KDVVKKLKDLAKKAEMVWLASDEDREGEAIAWHLAETLKLDKEKTKRIVFHEITKSAINK
AIENPRSIDYNLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
AVQNFEPVASYRIDAEFKTDNGNAFKAKLPKNFGSEADALKFLNNNIGAGYQVADLQKKP
AKKSAAAPFTTSTLQQEASRKLGFSVSRTMSNAQRLYEAGLITYMRTDSVNLSDEAKKGA
ESEIVSAYGVEYSNPKNYKGKSKGAQEAHEAIRPTNFANHTVNAERDQARLYDLIWKRAI
ASQMSDAKLERTNLKIQINSSNNVNEQFTANGEIITFEGFLKVYLEGTDDEHTEQEGILP
DLKVGEDLQNKYITATQRFTRPPSRFTEASLVKQLEELGIGRPSTYAPTISTIQNRNYVE
KGTHEGDERKYKQLVFEDGKIKDNALSEQTGSNKGKLVPTDIGMIVTEFLVKHFESILDY
NFTAKVEDKFDDIAEGKEDWRAMMKDFYKGFHPQVEDVQENAERESGERILGTDPKTGRQ
VSVRLGKFGPMVQVGVMDDEEKPKFASLSPDQQLNSITFEEAMDLFKLPKALGHYKDDEV
EVNNGRFGPYVRFGKKFVSLPKGVDPLSVELEEALIYIKEKELADAPIYMYKDLEVTKGK
GRFGPFIKWNNMFINVNKKYDWDNLSEEDIVTLIEEKIQKEIDKVIHNWEEEGVRVEKAR
WGRHNIIKGKQKVELAKTVDVSKMTLEKAQALLEKNAPKKKARKKTTKKKATTKKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaatctagtcatagttgagtcacctgcaaaggcgaaaaccatagaaaaattt
ttagggaaagattataaagtagagtctagttttggacatattgcggacttaccttctaaa
gaattgggagttgatgtcgatggagattttatgcccaaatatcaggtttcaaaagataag
aaagatgtagtaaagaaattaaaggacttagctaagaaagctgaaatggtatggttagca
agtgatgaggatcgagagggtgaagctattgcttggcacttggctgaaactttaaaatta
gataaagaaaaaacaaagcgtatagtatttcatgagattacaaaaagtgctattaataaa
gcaattgaaaaccctcgcagtatagattataatttagtagatgcacaacaagctagacgt
gttttagatcgtattgtaggttacgaattatcacctgtattatggagaaaagtaaaagga
ggattatctgcaggtagagtacagtcggtttcagttcgtttaatagttgaacgcgaaaga
gcagttcagaattttgaacctgtggcgtcctacagaattgatgcagaatttaaaacagat
aatggtaatgctttcaaagcaaaattgccaaagaattttggatcagaagcagatgcttta
aaattcttaaataataatataggtgcaggttatcaagttgccgatttacagaaaaagcca
gcaaaaaaatcagctgccgcaccatttacaacatcaaccttacagcaagaagcgtctcgt
aaattaggtttttctgtaagtagaactatgagtaatgcacagcgtttatatgaagcaggt
ttaattacctatatgagaactgatagtgttaacctttctgatgaagctaaaaaaggtgca
gaaagcgaaatagtttctgcgtatggtgttgaatatagtaatccgaaaaattataaaggt
aaatctaaaggagctcaagaagctcatgaagctataaggcctacaaattttgctaatcat
actgttaatgcagaacgtgatcaagcaaggttatatgatttaatctggaaacgtgctatc
gcatctcaaatgagtgatgcaaaattagaacgtaccaatcttaaaattcagataaattct
agtaataatgtaaatgaacagtttacagctaatggagaaatcatcacttttgaaggtttc
ttaaaagtgtatttagagggtactgatgatgaacatacagagcaagaaggtattttgcca
gatttaaaagttggagaagatcttcagaataaatacatcacagctacacaacgttttacc
agaccaccttcaagatttacagaagcatctctagtaaaacaattagaagaattaggtata
ggacgtccatctacatatgcaccaacaatttctacaattcagaatagaaactatgtggaa
aaagggacacatgaaggagacgaaagaaaatacaagcaattagtgtttgaagatggaaaa
ataaaagataatgcgctttctgaacaaacaggttcaaataaaggaaagttagtgcctact
gatataggtatgattgttacagaatttctagtgaagcattttgaaagtattttagattat
aattttacagctaaagtcgaagataagtttgatgatatagcagaaggtaaggaagattgg
cgtgctatgatgaaggacttttataaaggttttcatccacaagtcgaagatgtgcaggaa
aatgctgagcgcgaatctggtgaacgtattttaggtacagatccaaaaacaggtcgccag
gtgagtgtacgtttaggtaaatttggacctatggtccaagtgggtgttatggatgatgaa
gagaagcctaagtttgcaagcttatcaccagaccaacagttaaattctataacttttgaa
gaggctatggatctgtttaagcttccaaaagctttaggtcattataaagatgatgaggta
gaagtgaataatggacgatttggaccttacgtacgtttcggaaaaaaattcgtttcacta
cctaaaggagtagatcctttgagtgtagagttagaagaagctttaatatatattaaggag
aaggaattagcggatgctcctatatatatgtataaagatttagaagttacaaaaggcaaa
gggcgttttggaccatttattaaatggaacaatatgtttattaatgtcaataaaaaatac
gattgggataatttatctgaagaagacattgtaactttgatcgaagaaaaaattcagaaa
gaaatagataaagttatacacaattgggaagaagaaggtgtaagagttgagaaggcaaga
tggggaagacataatattattaaagggaagcaaaaggttgagttagctaaaacagttgat
gttagtaagatgactctagagaaagcacaagcactgctcgaaaaaaatgcacccaagaaa
aaggctcgtaaaaaaacaacaaagaaaaaagcaactactaaaaagaagtaa
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