Winogradskyella sp. PG-2: WPG_2683
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Entry
WPG_2683 CDS
T03603
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
win
Winogradskyella sp. PG-2
Brite
KEGG Orthology (KO) [BR:
win00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
win03400
]
WPG_2683
Enzymes [BR:
win01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
WPG_2683
DNA repair and recombination proteins [BR:
win03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
WPG_2683
Prokaryotic type
WPG_2683
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAO76913
UniProt:
A0A024FK60
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All DBs
Position
complement(2920702..2922006)
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AA seq
434 aa
AA seq
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MNKTLNIFWFRRDLRLDDNVGFFNALKSDNPVLPIFIFDSEILDKLPENDARVNYIHDTL
QSMRMILQDNHDSGIAMFHGKPKDIYKQLIKDYDISEVYTNHDYEPYANERDTKIKDFLA
EQNINFKTYKDQVIFEKDDVVKKDGNPYVVYTPYMRTWKEKFKSNDLKFYPSEKALGNLV
KKINLPNLSLSDIGFKESSQKILSYKLTPTLIQEYEATRNFPAKDSTSRLGPHLRFGTVS
VRKMVEKAIAEENEIFWQELIWREFFMQILWHFPYTAKDSFKSKYDRIEWRNNEEEFKLW
CEGKTGYPFVDAGMRQLNETGFMHNRVRMLVGSFLCKHLLIDWRWGEAYFAEKLHDYEMS
SNIGNWQWVAGSGVDAAPYFRIFNPTSQIQKFDKGLEYIKKWVPDFEKLTYHQPIVDHKT
ARERCLNTYKSALN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacgctaaatattttttggtttagaagagatctaagattagatgataatgtt
ggcttttttaatgctttgaaatctgataaccctgtactaccaatatttatctttgattct
gaaattctagataagcttcctgaaaatgatgcgcgtgtcaattatattcatgatacactt
caaagtatgaggatgattctacaggataatcatgatagtggtattgcaatgtttcatggt
aagccaaaagacatatataagcagttaattaaagattatgatatctcagaagtttataca
aatcatgactacgaaccttatgcaaacgaacgcgacacaaagattaaagattttttagca
gaacaaaatattaattttaaaacctacaaagaccaagtcattttcgaaaaagatgacgtg
gtaaaaaaagatggtaatccatatgttgtttatactccatacatgcgcacatggaaggag
aagtttaaatccaatgatttaaaattttatccatctgaaaaagcgctaggtaatcttgtg
aaaaagataaatttaccaaatttgagtttatcagatattggtttcaaagaatcgtcacaa
aaaatcctttcttataaactaacaccaactttaattcaagaatacgaagctacaaggaac
tttcctgcaaaagactcaacctctcgtttaggccctcatctccgttttggcacagtaagc
gtgcgcaaaatggtagaaaaagctattgctgaagaaaacgaaatcttttggcaagaatta
atttggcgtgagttttttatgcaaattctttggcatttcccatatacagcaaaagattcc
tttaagtctaaatacgatcgaatagaatggagaaataacgaagaagaatttaaactctgg
tgcgaaggtaaaaccggttatccgtttgtagatgctggcatgcgccaattaaatgaaact
ggctttatgcacaatagagtacgtatgttagtcggtagctttttgtgcaaacacttatta
atagattggagatggggagaagcctactttgctgagaaattacatgactatgaaatgtct
agtaatataggtaattggcaatgggtcgctggttctggtgttgatgctgctccatatttt
agaatttttaacccgacatcgcaaatccaaaagtttgataaagggttagaatacataaaa
aaatgggttcctgattttgaaaaattaacgtatcatcaaccaattgtagatcataaaaca
gctagggaacgttgcttaaacacatataaatcggcattaaattaa
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