Winogradskyella sp. PG-2: WPG_2763
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Entry
WPG_2763 CDS
T03603
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
win
Winogradskyella sp. PG-2
Pathway
win03420
Nucleotide excision repair
win03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
win00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WPG_2763
03430 Mismatch repair
WPG_2763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
win03400
]
WPG_2763
Enzymes [BR:
win01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WPG_2763
DNA repair and recombination proteins [BR:
win03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WPG_2763
MMR (mismatch excision repair)
Other MMR factors
WPG_2763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAO76993
LinkDB
All DBs
Position
3000189..3002525
Genome browser
AA seq
778 aa
AA seq
DB search
MEKYLSQLNDAQLAPTIQKDGPMIVIAGAGSGKTRVLTYRIAYLMSQGVDAFNILALTFT
NKAAKEMKGRIADIVGDGEAKNLWMGTFHSVFAKILRFEGHHLGFPSNFTIYDTQDSQKL
MGSIIKEMGLDKDIYKTKQIYSRISSYKNSLITVKAYLRNPELMEADAMARRPKMGEIYK
EYVDRCFKAGAMDFDDLLLRTNELLTRFPNVLAQYQNKFRYILVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDDVKMYRLEQNYRSTKMIVGAANS
VIEHNKTKLDKIVWTANENGEKVKVHRSLTDGDEGRYVASTIWETKMNNQLHNSDFAVLY
RTNAQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVTAYLRLILNSADEEALKRVINYP
ARGIGQTTVDRLVVAANATGRTIYDIMKDIDSVNININNGTKNKLRDFVTLIESYKVMNQ
KANAFDLAEHVTKTSGLIRELNKDGTPEGVTRMDNVQELLNGIKDFVEGQIELADAGDSL
AEFLEDIALATDLDADKGDPDHVALMTIHLAKGLEFGHVFIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTLSRYRWGKLIDAEPSRFIEEIEDKFVNIVTPLKEQR
FNPMLDESIFGDIEPNRIRFAKPKTAKMPKKKAKDKPENFVISTPKKMKPVTKSESDTHD
YEGKLQVGTRVNHQRFGRGEVIKIEGKGGDAKAEIKFQKGDTKKLLLRFAKLQILSRN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagtatctcagtcaacttaacgatgcacaattagcaccaactattcaaaaagac
ggcccaatgatcgtcattgctggtgctggctctggtaaaacacgtgttttaacctatcgt
attgcttatttaatgagtcaaggtgtggatgcgtttaatattttggcattaacctttacc
aataaagctgctaaagagatgaaaggtagaattgctgatatcgttggtgatggtgaagca
aaaaacctatggatgggaacgtttcattccgtttttgctaaaattcttcgctttgaaggt
catcatttaggttttccaagcaattttacgatttacgatactcaagattcacagaaatta
atgggttctattataaaagaaatgggacttgataaagatatttataaaaccaagcagatt
tatagtcgtatatcatcttacaagaacagcctaatcactgtaaaagcatatttaagaaac
cctgaattaatggaagctgatgccatggcacgtcgtccaaaaatgggcgaaatatataaa
gaatatgtagatcgttgttttaaagcaggagcaatggattttgatgatttattgctaaga
actaatgagttgttaacacgatttcctaatgtcttagcgcaatatcaaaacaagtttaga
tatattttagtggatgagtatcaagataccaaccattcgcaatacttaattgtaagagct
ttggctgatcgttttcaaaatatttgtgttgttggtgatgatgcacaaagtatatatgcc
ttccgtggtgctaatattaataatattctcaattttcagaaagattacgatgatgtaaaa
atgtatcgactggaacaaaattatcgctctacaaaaatgatagtaggtgctgctaattct
gttatagaacacaataaaaccaagctcgataaaattgtatggactgcaaatgagaatggt
gaaaaagtaaaagtacaccgttccttaactgatggtgatgaagggcgttatgtagcaagt
accatttgggaaaccaaaatgaataatcaattgcataatagcgattttgcagtattgtac
cgcactaatgcgcaatcacgtgctatagaagatgctttgcgtaagcgagatattccttat
cgcatttatggtggattatcgttttaccaacgaaaagaaattaaagatgttactgcttat
ctgcgtttaatattgaattccgctgatgaagaagcattaaagcgcgttataaattatcct
gcaagaggtattggtcaaaccacagtagatcgccttgttgttgcggctaatgcaaccgga
agaactatttatgatattatgaaagacattgatagtgtcaatataaatattaataatggt
acaaaaaataaactcagagattttgtaacgcttattgaaagttataaagtgatgaatcaa
aaagctaatgcttttgatctagctgagcatgttacaaaaactagtggtttaataagagaa
ctgaataaagatggtactccagaaggtgtaactcgaatggacaatgttcaagaactttta
aatggtattaaggattttgtagaaggacaaattgaactcgcagatgctggagactcacta
gctgaatttttagaagatatagcattggcaacagatttagacgctgataaaggtgatcca
gatcatgttgctttaatgaccattcacttagctaaaggattagagtttggacatgtattt
atcgttggtatggaagaagatttatttccaagtgcaatgagtatgaatacaagaagcgaa
ttagaagaagagcgtcgattattttacgtagctttgacaagagcagaaaaacaagcgtat
ttaacatatacgttatcacgttatcgatggggaaaattaattgatgcagaaccaagtcgc
tttattgaagagatagaggacaaatttgtaaacattgttacaccccttaaagaacagcgt
tttaacccgatgttagatgaatctatatttggagatattgagcccaatcgtattagattc
gcaaaaccaaagacagcaaaaatgccaaaaaagaaagcaaaagataaacctgaaaatttt
gtaattagtacacctaaaaaaatgaagccagtcacaaaatctgagagtgacactcatgat
tatgaagggaaactgcaagtaggaactagggttaatcatcaacgttttggtagaggagaa
gttataaagattgaaggtaaaggtggagatgctaaagctgagattaaatttcagaaaggg
gatactaaaaaattacttttgcgttttgctaaacttcaaattctttcaagaaattaa
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