Weissella jogaejeotgali: FOL01_0963
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Entry
FOL01_0963 CDS
T04632
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
wjo
Weissella jogaejeotgali
Pathway
wjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOL01_0963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wjo03400
]
FOL01_0963
DNA repair and recombination proteins [BR:
wjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOL01_0963
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOL01_0963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA
UvrD-helicase
AAA_22
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
APS41822
UniProt:
A0A1L6RBG8
LinkDB
All DBs
Position
complement(1038827..1040842)
Genome browser
AA seq
671 aa
AA seq
DB search
MFNRDTDNEYDLVSKYQPTGDQPEAITKLVNGLKNGIKEQVLLGATGTGKTFTISNVIAQ
ANKPVLVLSHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRNSATASLLARNDTIVVSSVSSIFGLGSPEQYYDHVINVRVGDILERNDFMHR
LIDIQFQRNDIDFQRGRFRARGDVLEVFPASSDSKALRIEFFGDEVDRIREIDALTGEIT
SELDLATIFPATHFMTNDAIRERALKTIQAELDDQLQSLEKDGKLLEAQRLKQRTEYDIE
MIREMGFTTGIENYSRHMDGRKPGEPPFTLLDFFPDDFIIIVDESHVTMPQVRGMYKGDR
ARKETLINYGFRLPSALDNRPLRLEEFENHVNQIIYMSATPGDYENERVPKENVAQQIIR
PTGLLDPEIEVRPVMGQIDDLIGEINKRVANEERVFVTTLTKKMAEDLTDYLEDVGIKVK
YLHSDIKTLERTEIIRDLRIGKFDVLVGINLLREGIDVPEVSLIAILDADKEGFLRNTRS
LIQTIGRAARNENGHVIMYADSVTASMQSAMDETSRRRNIQMQYNEEHNITPHTIKKDIR
DLISVSHEVDNDSKEEGSFTDVAFKDMARDDQNAMIANLEDQMRAAAKRLDFEDAANLRD
AVMELKLQIGK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgtgatactgataatgaatacgatttagtttcgaaataccaacccaccggt
gatcaacctgaggcgattacaaaattagtcaacggtttaaaaaatggtatcaaagaacaa
gtcttactaggtgctaccggaacagggaagacatttactatttcaaatgtcattgcacaa
gcaaataagccagttttagtattatcacacaacaaaaccttggcgggacaattatacggt
gaattcaaagaatttttcccgaataatgctgttgagtattttgtttcttactatgattac
tatcaacctgaggcgtatgttccttcatcagatacttatattgaaaaggattcatctatt
aatgatgagattgataagctccgaaattctgcaactgcctcgctactagcgcggaacgac
acaattgtggtttcctcagtttcgtcaatctttggtttaggtagtccagaacaatattat
gaccatgttattaatgtccgtgttggagacattttagaaagaaatgatttcatgcatcgg
ttaatagatattcaattccagcgtaatgatattgattttcaacgtgggcgttttcgtgct
agaggtgatgttttagaggtattcccggcatcatctgattctaaagcactgcgaattgaa
ttttttggggacgaggtagatcgtattcgtgaaattgatgcgctaacgggagaaataacg
tccgaattagatttggccacaattttcccagcaacgcactttatgacaaatgacgcaatt
cgtgagcgtgctttaaaaacaattcaagccgaattagatgaccagttgcaaagtcttgaa
aaagatggcaaattacttgaagcacagcgacttaagcaacgcactgaatatgatattgaa
atgattcgagaaatgggtttcaccaccggtattgagaattactcacgtcatatggatggt
cgtaaacctggcgaaccaccattcacactgttagacttcttcccagatgattttattatt
atcgttgatgagtcacacgtaacgatgccacaagttcgtggtatgtataaaggtgaccgt
gctcgaaaagaaaccttaattaattatggttttcgactaccatcagctcttgataatcgg
ccattacggctcgaagagtttgaaaaccatgttaaccaaattatttacatgtcggctacg
ccaggtgactatgaaaatgaacgcgtaccaaaagagaacgtcgctcaacaaatcatccgt
ccaactggactacttgatcctgaaattgaagttcggccggttatgggtcaaatcgatgat
ctaattggggaaatcaataaacgtgtggcgaatgaagaacgtgtttttgtaactacctta
actaaaaaaatggctgaagacctaactgactacctagaagatgttggtattaaagttaag
tatctacattcagacattaaaactttagaacgtaccgaaattattcgtgatttacgaatt
ggtaaatttgatgtgttggttgggattaatctattacgtgaaggaattgacgttcccgaa
gtatcattaattgctattctagatgcggataaagagggcttcttacgtaatacccggtca
ttgattcaaacaattggtcgtgcagcacgtaatgaaaatggtcatgtgattatgtatgca
gattccgttaccgcttcaatgcaatcggctatggatgagacatctcgccgtcgtaatata
caaatgcaatataacgaagaacataacattacaccacataccattaagaaagatattcga
gacttgatttctgttagccatgaagtggataatgattcaaaagaagagggtagctttact
gatgttgcctttaaagacatggcacgtgatgatcaaaatgcgatgattgccaatcttgaa
gatcaaatgcgcgctgctgccaagcgccttgatttcgaagatgctgccaatctacgtgat
gcagtcatggaactaaaattacaaataggcaaatag
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