Weissella jogaejeotgali: FOL01_1580
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Entry
FOL01_1580 CDS
T04632
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
wjo
Weissella jogaejeotgali
Pathway
wjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOL01_1580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wjo03019
]
FOL01_1580
03400 DNA repair and recombination proteins [BR:
wjo03400
]
FOL01_1580
Enzymes [BR:
wjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOL01_1580
Messenger RNA biogenesis [BR:
wjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOL01_1580
DNA repair and recombination proteins [BR:
wjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOL01_1580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RQC
RecQ_Zn_bind
ResIII
TniB
HHH
Prefoldin_3
MukE
AmiA-like
Motif
Other DBs
NCBI-ProteinID:
APS42439
UniProt:
A0A1L6RD01
LinkDB
All DBs
Position
complement(1660391..1662220)
Genome browser
AA seq
609 aa
AA seq
DB search
MQSALETLQQSFGYDDFREGQAEIIDAVLAGKRTLGIMPTGGGKSITYQVPALMLPGITV
VISPLISLMKNQVDELIANGIDAVTLNSTQDEETYHHAMNHLLNGQAKLLYLAPERLKNE
GTYALLNRLDISLVVIDEVHVLSQWGHDFRPSYLEAVHLINNLMSAPRVMALTATATQRV
QKDLEERLAIDHTVRTSVVRDNLTIRMETGLKKKDKDDYVQRYVQKHADEAGIIYVPTRK
LVTSLTAFLTSRHLSVVGYHAGMTDEERNQAQDDFLFDRANVVVATNAFGMGINKSNVRF
VIHYSMPGSIEAYYQEIGRAGRDHLPAEAILLYAAADLQRQRFFIENSDNQTPEYQRLQK
NKLQEMANYGATTVCLQQYITRYFGEETLPCGHCTNCLDTRTAIDVTTDAQKVLSHIVRM
RNARHNKDAFGKIVTADTLRGHVPEKFKWAHFDQLPTFGLMKGIPRVKIASLIDFLLASG
YLQITGEYSGLMVSKTGLQVLQGELQVMRRQSKQMIDDRVTTGSPLTQDDLDESEKAVFT
ELRKWRLELSKKTSVPSFIIFNDRTLVELARQQPKSLTELLNISGIGQAKADKYGQEVLQ
AIAQVATNE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcattagagacattacaacaatcatttggttatgatgattttcgtgaagga
caggctgaaattattgatgcggtcctagctggtaaacggacactaggaattatgccaact
ggtggtggaaaatcaattacttatcaagtgccagcattaatgctgccaggaattacagtg
gttatttcaccgttgatttcattgatgaaaaatcaggttgatgaactgattgcgaatggc
atcgatgcagtgactttaaactcaacacaagatgaagaaacttatcaccatgcgatgaac
catctgttaaacggccaagcaaaattattgtatttagcacctgaaaggttaaaaaatgaa
gggacttacgccttattgaatcgtttagacatctcattggtggtgatcgatgaggtccat
gtgctatcacaatgggggcatgattttcgaccaagttatcttgaagctgttcatctaatc
aataatttgatgtcagctcctcgggttatggcgttaacggcaacggccacgcaacgcgtt
caaaaggatttagaagaacgcttggctattgaccatacagtgcgtaccagtgtggtccgt
gataatttaacgattcggatggaaacggggttaaaaaagaaagataaggatgattatgtc
caacgttatgtgcaaaaacatgccgacgaggctgggattatttatgtaccaacgcgtaaa
ctagtaacgagtttgacggcatttttaactagccgacatttatcggtcgttggctatcat
gcggggatgactgatgaggaacgtaatcaggcacaagatgattttttgtttgatcgcgct
aatgttgttgtagcgactaatgcttttggtatgggaatcaacaagtctaatgtccgcttt
gttattcattacagtatgcccggatcaatcgaggcatactatcaagaaatcggtcgtgcc
ggtcgtgatcatttaccagcagaggctatcttgctatatgcagcggctgatttacaaagg
caacgattctttattgaaaatagtgataatcaaacgccggagtatcaacgtttgcaaaag
aataaattgcaagaaatggccaactatggagccacaacggtttgtttgcaacagtacatt
acacgttattttggggaagaaacattaccttgcgggcattgtacaaattgcttagataca
cgaacagcgattgatgtgacaaccgatgcacaaaaagttttaagccatattgtgcgtatg
cgaaatgctcgacacaataaggatgcatttggaaaaattgtgactgcagatactttgcgt
ggtcatgtaccagaaaaatttaagtgggcacattttgatcaattaccgacctttggctta
atgaaggggataccaagagttaagattgcttcattgattgactttttgttggcctctggc
tatttgcaaataactggtgaatatagtggcttaatggtttcaaaaactgggttacaagtt
ttgcaaggtgaacttcaagtgatgcgacgtcagtcaaaacaaatgattgatgatcgggtt
acgactggttcgccattgacacaagatgatttagatgaatctgaaaaagcagtatttact
gaactacgcaagtggcgtttagaattatccaagaaaacatcagtaccttcatttatcatt
tttaatgatcgaactttagtcgaactagcgcgccaacaacctaaatcattaactgaacta
cttaatatttcggggattggtcaagccaaagcagataagtatggtcaagaagttttgcaa
gctatcgctcaagtagcaacaaatgaatag
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