Weissella koreensis: WKK_00775
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Entry
WKK_00775 CDS
T01577
Name
(GenBank) ATP-dependent RNA helicase/autoaggregation-mediating protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wko
Weissella koreensis
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wko03019
]
WKK_00775
03009 Ribosome biogenesis [BR:
wko03009
]
WKK_00775
Enzymes [BR:
wko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WKK_00775
Messenger RNA biogenesis [BR:
wko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WKK_00775
Ribosome biogenesis [BR:
wko03009
]
Prokaryotic type
rRNA helicases
WKK_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEJ23031
LinkDB
All DBs
Position
complement(163624..164994)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKFTDYNLKSEIYQALGAINFKEPTPVQEKMIPVILQGRSVVGQSQTGSGKTHAFLIPI
FEKLNLTESTVQVIITTPSRELAAQINRAAKQIADMFDEKIRPQIGYYVGGTDKARQTAQ
LENKQPQIVIGTPGRIHDLSKNGALDIHKASTLVIDEADMTLDGGFLPDVDAIAGALPSD
LQMMVFSATIPKKLQPFLKKYLNNPIIEEIPSETVIANTITNLLVGTKGKTKDEVVYSLL
TMGNPYMALVFTNTKVRAKELAKYLRQQGLKVAEIHGDIQPRERRRVMTAIQRLDYQYVV
ATDLAARGIDIPGVDLIINDGIPNELEFFIHRVGRTGRNGQTGTAITIYNPDEEDRVASV
EKMGIEFQPKNFSHGELKDGIDRRRRRQRHKSTQKLDPTMLGMVKKKKKHVKPGYKHQIK
AAIAKDARFKKRVSDREELRANRKTKKKASDQARGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttacggattataatttaaaatcagaaatatatcaagctctaggtgcaatc
aactttaaagagccaacaccggttcaagagaaaatgattccagtgattctacaaggtcgt
tcagttgtgggacagtcacaaactggatcgggtaagactcatgctttcttgatcccaatc
tttgaaaaattgaatttaacggaatcaacagtacaagttattatcactacaccttcaaga
gaattagcggctcaaattaatcgtgctgctaagcaaattgcggatatgtttgatgaaaaa
attcggcctcaaatcgggtactacgttggtggaaccgataaagcccgtcaaactgcacaa
ctagaaaataaacaaccacaaattgttatcggaacacctggtcgaattcatgacctttca
aaaaatggagctttagatatacataaagcatcaactttagttattgatgaagctgatatg
acattggatggtggtttcttaccagatgttgatgcgattgctggagcgttgccaagtgat
ctacaaatgatggtattttcggctacgattcctaaaaaattacaaccatttttgaaaaag
tatttaaataacccaattattgaagaaattccaagtgagacggtaattgctaatactatt
acaaatctattggttggaactaagggtaagacaaaagatgaagtcgtttatagtttgtta
acgatgggtaatccatacatggccttagtatttactaatactaaggttcgtgccaaagaa
ttggctaagtatttacgacaacagggacttaaagttgctgaaattcacggagatattcaa
ccacgagaacgtcgtcgagtgatgactgctattcaacgacttgattatcaatatgtcgtg
gcaaccgacttagccgctcgaggaattgatattccaggggttgacttgattattaatgat
ggtattccaaatgaattggaattctttattcatcgagttggacgaactggtcgtaatggt
caaactggaacggcaattacaatttataatccagatgaagaagaccgagtagctagtgtt
gaaaaaatggggattgaattccaacctaaaaactttagtcatggggaattgaaggacgga
attgatcgtcgtcgtcgtcgtcaacgacataagtctacccaaaagcttgatccaacgatg
ttggggatggttaaaaagaagaagaagcacgttaaaccaggatataagcatcaaattaag
gcagcaattgctaaagatgctcgctttaagaaacgagtttctgaccgtgaagagttacgt
gctaatcgtaagactaaaaagaaagcatctgatcaggctcgcggaaaataa
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