Weissella koreensis: WKK_00915
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Entry
WKK_00915 CDS
T01577
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wko
Weissella koreensis
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wko03032
]
WKK_00915
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_00915
Enzymes [BR:
wko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WKK_00915
DNA replication proteins [BR:
wko03032
]
Prokaryotic type
DNA Topoisomerases
WKK_00915
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WKK_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Cys_rich_KTR
Toprim_4
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
AEJ23059
LinkDB
All DBs
Position
complement(191218..193359)
Genome browser
AA seq
713 aa
AA seq
DB search
MPTTTKDKPKAKKRTTTKRKKNLVIVESPSKAKTIEKYLGSGYKVVASIGHIRDLPKSQM
GVDTENDYNPKYINIRGKGDVIKNLKKEAKAAKHVYLASDPDREGESIAWHLAHILDLDT
SSEENRVVFNEITKDAVKDAFKRPRQLDMNLVNAQQARRILDRLVGYSISPLLWKKIKKG
LSAGRVQSGALGLIIDRENDIQAFQPEEYWELPAEFKKSNKKFKAGFYGLDGQKVKRIPD
NEMVQSILKRIDQNQEFDISEVVKSEGKNNPSPAFTTSTLQQAANTQLSFQTRRTMSTAQ
QLYEGINLGGKEGSVGLITYMRTDSTRISSIAKNDASKFIHEEYGDEYAATKPVQGKLQE
GAQDAHEAVRPTSVFRTPKSIKDKLTNDQFKLYQLIWSRFVASQMTAEVIDRVRVTLTQN
GVMFRANGATTKFAGYTKAYPAAKAKDNVLPEMVEGGNVKLDKINPEQKFTQPKPRYTEA
ALVKALEEAGVGRPSTYAATIETLKSRAYVKMDAKKFIPTEIGKMVQDAVRDYFPDVADL
KFTAQIEGELDNVETGNEDWVKVVDEFYKPFKGELDIAESEMEKIVVKDKLAGENCEICG
APMLERLGRYGKFFACSRFPDCRNTKTIVKEIGLVCPKCHQGQIIERKTKRGRTFYGCSR
YPDCEFISWDKPTEKTLADGTTPKDGEDNKKSKTTKSKKPATKKATKKKAAKK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacaacgacaaaagataaaccaaaagctaaaaagcgtaccaccactaaacgaaag
aaaaatttagtaattgttgaatcaccatcaaaagccaaaaccattgaaaaatacttagga
tctggatataaagtagttgccagtatcggacatattcgtgatttaccaaagtcacaaatg
ggagttgatactgaaaatgactataaccctaaatatataaatattcgtggaaagggggat
gtcataaaaaacttgaaaaaagaagctaaagcagctaaacatgtttatttagcatctgac
ccggatcgtgaaggagaatcaattgcctggcatttggcgcatattttagatcttgatact
agttctgaagaaaatcgagtggtctttaatgaaattactaaagatgcagttaaagatgcc
tttaaacgcccacgccaattggatatgaatttggttaatgctcaacaggcacgccgaatt
ttagaccgtttggttggctactcaatctcgcctcttctatggaagaaaattaaaaaagga
ctgagtgctggtcgggttcaatctggagcattgggtttaattattgatcgtgagaatgat
attcaagcctttcagcctgaagaatactgggaattaccagctgaattcaaaaaatctaat
aagaaatttaaagctggattttatgggttagatggtcaaaaggttaagcgaatcccagac
aatgaaatggttcaatcaattttgaaacgaatcgatcaaaatcaagaatttgatataagt
gaagtcgttaagagcgaaggaaaaaacaatcccagtccagcttttacaacttcaactttg
caacaggcagctaacacgcaattgagttttcaaactcggcgtacgatgtctacagcgcaa
caattatatgaaggaattaatctgggtggtaaagaaggttcagttgggttaattacctat
atgcgtaccgattccacacgaatatcatccattgctaaaaatgatgcatctaaatttatt
catgaagaatatggtgatgaatatgctgccactaaaccagtacaaggtaaattgcaagaa
ggggcacaggatgctcatgaggcagttcgacctacttcggttttccgaacacctaaatca
attaaggacaagttaactaatgaccaatttaaactttatcaattgatttggtcacgtttt
gtggcctctcaaatgacagcagaagttattgatcgggtccgagttactttgacacaaaat
ggagttatgttcagagctaatggagctacgactaaatttgctggttatacaaaagcttac
ccagctgctaaagctaaagataatgttctacctgaaatggtagagggtggtaatgttaag
cttgataaaattaatcctgaacaaaagtttactcagcccaagccacgttatactgaagct
gcgttggttaaagctttggaagaagctggtgttggacgaccatcaacttatgctgctacg
attgaaactttgaaatcacgagcatatgtcaaaatggacgcaaagaaatttattccaact
gaaattggtaaaatggttcaagacgccgttcgagattatttccctgatgtagctgatcta
aaatttactgcccaaattgaaggggaactagataatgttgaaactgggaatgaagattgg
gttaaagtagttgatgaattttataaaccatttaaaggtgagctagatatagctgaatca
gaaatggaaaaaattgttgtcaaagataagttagccggtgaaaactgtgaaatttgtggg
gctcctatgttggaacgccttggacgatatggtaaattctttgcttgctcacgttttcct
gattgtcggaatactaaaacaattgtaaaagaaattggcttagtttgccctaagtgtcat
caaggtcaaattattgaacgaaagacaaaacgcggtcggactttctatggttgctcacgt
tatcctgattgtgagtttatctcatgggataagccaactgaaaagacattagctgatgga
actacacctaaagatggtgaagataataaaaaatctaagaccactaaaagtaagaaacca
gccacgaaaaaagcaactaaaaagaaagctgctaaaaagtaa
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