Weissella koreensis: WKK_01460
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Entry
WKK_01460 CDS
T01577
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
wko
Weissella koreensis
Pathway
wko03030
DNA replication
wko03430
Mismatch repair
wko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WKK_01460 (holA)
03430 Mismatch repair
WKK_01460 (holA)
03440 Homologous recombination
WKK_01460 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wko03032
]
WKK_01460 (holA)
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_01460 (holA)
Enzymes [BR:
wko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WKK_01460 (holA)
DNA replication proteins [BR:
wko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WKK_01460 (holA)
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WKK_01460 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AEJ23168
LinkDB
All DBs
Position
complement(288867..289889)
Genome browser
AA seq
340 aa
AA seq
DB search
MAVNLKTIEDDVAAGKIAPVYLVQGTDQYLMDQAHQIFVNMIPEDERSMNFATYDLREQN
LSNALDDARSMPFFGERRVVIIDNTYILTGEQVKNKLDHNPEELLDYLQHPEPQTTLVLM
APYEKLDRRKKITKLLQEQSVHLSFGNLSENDVKKIVDIRLKGQGFTITAGALQRLFQIT
NLNLSQIMQELQKVTLYAIPEKEISEKMIQATATKTLNDSVFDLIDLIINFKVNQAVLLY
HQLILNGEEPLRLQGAMTSHFRLLLQVKASTMSEQGTAKALGIHPYRIKLARKTVQKFQY
QQLAKTYLQLVHMEQQIKTTQRDPELLFELFMLKVGHSNN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaatttaaaaacaattgaagatgatgttgccgcaggtaaaattgcacctgtg
tatttggtgcaaggtactgatcagtatttaatggatcaagcacatcaaatatttgttaat
atgatccctgaagacgagcgatcaatgaatttcgcaacttatgatcttagagaacaaaat
ttgtcaaatgcgttggatgatgcccgatcaatgccgttttttggtgaacgtcgggtcgtg
ataattgataatacgtatatcttaactggagaacaagttaaaaataagctggatcataat
cctgaggaattattagattatttacaacatcctgagccacaaaccactttggttttgatg
gctccgtatgaaaagttggatcgcagaaaaaagatcactaaattattacaagaacaaagc
gttcatttatcttttggtaatttgtctgaaaatgatgttaaaaaaattgttgatattaga
ttaaagggacaaggatttacgattacagcaggggcgttacaacggttatttcaaataact
aatttaaatttatcgcaaattatgcaagagctacaaaaagtaactttgtatgcgatacct
gaaaaagaaattagtgaaaaaatgattcaggcaacggcaactaaaacattaaatgatagt
gtttttgatttgattgatctaatcatcaattttaaagttaatcaggcagttttgttatat
catcaactaattttaaatggagaagagccattgcgattgcaaggggcgatgacaagtcac
ttccgactacttttacaagttaaagcttctactatgagtgaacaagggacagctaaggct
ttggggatccatccttatcgaattaaattagctcgaaaaacggttcaaaaatttcaatat
caacaactggcgaaaacatatttacaattagttcatatggagcaacaaattaagaccaca
cagcgagatccagaattgttatttgaactatttatgttaaaagttggacatagtaataat
taa
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