Weissella koreensis: WKK_01815
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Entry
WKK_01815 CDS
T01577
Name
(GenBank) superfamily I DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wko
Weissella koreensis
Pathway
wko03420
Nucleotide excision repair
wko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WKK_01815
03430 Mismatch repair
WKK_01815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_01815
Enzymes [BR:
wko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WKK_01815
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WKK_01815
MMR (mismatch excision repair)
Other MMR factors
WKK_01815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
DEAD
NACHT
AAA_16
RST
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AEJ23239
LinkDB
All DBs
Position
complement(366627..368906)
Genome browser
AA seq
759 aa
AA seq
DB search
MNEFEYEQKRLDHVLDKIEQAQQDNNAQLARAEEGQVEVEKGWNDVRFKSSTYSGLFETA
MSVRQQQQMLQEREMAQTSAQHQAQTLARLAKNPYFARIDVQDEGSDKIEPIYIGLASFS
DQPDNFLVYDWRAPISSIYYDAGLGSVTYETPVGPQAANVSLKRQFQIEDKKIVTLFDTD
EVVGDQMLLDAVAGESSTKMKSIVTTIQREQNKIIRNTHAELLFVQGAAGSGKTSAVLQR
VAYLLYRYRGNLTAGQVVMFSPNQLFNDYIDQVLPEMGEQNMIQMTFYQYASRRLPKLKL
ETLQARFEESQPAWRQKINQFKGTKLYFDLIKVYTDQLNQTGIRFRSIKFRGKEMISKEQ
IADIYYSFNENYKLGQRLEVTKERLLSKVRGIIGAEMKADWVEYAIQNLSKEEYDSILGD
QVREFKDEKAEYNALAKIIVQNEMRPVLQQISRTRFLNINAQFLDLLRFVPKLTDLTQVG
INDEEWEKSLALTIEELKQKELNLADMTPFMYLFDVIKGSHGERDIRFVFIDEIQDYTPF
QLAFLKFSFPKARFTMLGDLNQAIFTKANAVTLQDELKELFGAEKTEFIQLTQTYRSTQQ
ITDFAKATLINGVQIDAFERTGAKPTIEILPNDTAMTEAVLTQLTQNDQIDETTAIITKT
LKEAEQVYVYLNESHPVTVIRTENQRLVPGVIIVPAYLAKGLEFDAVIMWDASATNYNGD
DERQLVYTIASRAMHQLTIVAKQQLSPLLNVDPNLYDRK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatttgaatatgaacaaaaacgtctagatcatgttttagacaagattgaacaa
gcccaacaagataataatgctcaactggctcgtgctgaggagggccaagtagaagtagaa
aaagggtggaatgatgttcgatttaagtcatccacttattcgggattattcgaaaccgcg
atgtcagttcgacaacaacaacagatgttacaagaacgggaaatggcccaaacttctgct
caacatcaagctcaaactttagcccgtttggcaaaaaatccttattttgcacgaattgat
gtccaagatgaaggatctgataaaatagaacccatttatattggtttggcttctttttca
gatcaacccgataattttttggtatatgattggcgggcgccaatttcatctatttattat
gatgcagggttaggatctgttacatatgagacacctgttggaccacaggcggcaaatgtc
agtttaaaacgacaatttcaaattgaagataaaaaaattgtaaccctatttgacacagat
gaagttgttggtgatcaaatgttgttagatgccgttgctggtgaatcatcaacgaagatg
aaatcgattgtaacaacgattcaacgagaacaaaataaaattatccggaatactcatgct
gaactattgtttgttcaaggggcagccggatcaggtaaaacttcagctgtcttacaacga
gtggcatatcttttgtatcgttatcgaggtaatttaacagctggtcaggtggtaatgttc
tcaccaaatcaattgtttaatgattatattgatcaagtgctacccgaaatgggtgagcaa
aatatgattcagatgaccttctatcagtatgcttcacgacgattaccaaaattgaagtta
gagacgctacaagcccgatttgaagagagtcaacctgcttggcgccaaaaaattaatcaa
tttaaaggaactaaattatatttcgatcttattaaagtttatactgatcaattaaatcag
acaggaattcgcttccgatcaattaaattccgaggtaaggagatgatttccaaagaacaa
attgctgatatttattattcattcaatgaaaactataaattagggcaacgtttggaagtg
actaaggaacgtttattaagtaaagttagagggataattggggccgaaatgaaggctgat
tgggtggaatatgccattcaaaatctttcaaaggaagaatatgattcaattttaggtgat
caagttcgtgaatttaaagatgaaaaagctgagtataacgcactagccaaaattattgta
caaaacgaaatgcgaccagttttgcaacaaattagtcggacacggttcttgaatattaac
gcccaatttttggacttattacgatttgttcctaaattaactgatttaactcaagttggg
attaatgatgaggaatgggaaaagagtttagcgctcacaattgaggagttaaaacaaaaa
gaattaaatttggctgatatgacaccatttatgtacttatttgatgtaattaaaggaagt
catggggagcgtgatattcgatttgtctttattgatgaaattcaagattatactcctttc
cagttagcatttttgaaattcagttttccaaaagctcgctttacgatgttaggtgatttg
aatcaagctatctttaccaaggcgaatgcagtcaccttacaagatgagttaaaagagcta
tttggagccgaaaagactgaatttattcaattaacacaaacatatcgttcaacacagcag
attactgattttgctaaagctaccctaatcaatggggttcaaattgatgcatttgaacga
actggtgctaagccaacgattgaaattttgccaaatgacacagcgatgacagaagcagtc
ttgacgcaattaacacaaaatgatcaaattgatgagacaacggcgattattacgaaaaca
ctcaaagaggcagaacaagtttatgtttacttaaatgaaagccatcctgtgacagtaata
cgcacggaaaaccagcgattagtgccaggcgtaataattgttccggcttacttagctaag
gggcttgaatttgatgctgtcattatgtgggatgcttcagctactaattataatggtgat
gatgagcgtcaattggtttatacgattgcttcaagagctatgcatcaattaacaattgtg
gctaaacaacaacttagcccattgttaaatgtggatcctaatctttacgatagaaagtaa
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