Weissella koreensis: WKK_01970
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Entry
WKK_01970 CDS
T01577
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
wko
Weissella koreensis
Pathway
wko03030
DNA replication
wko03430
Mismatch repair
wko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WKK_01970
03430 Mismatch repair
WKK_01970
03440 Homologous recombination
WKK_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wko03032
]
WKK_01970
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_01970
Enzymes [BR:
wko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WKK_01970
DNA replication proteins [BR:
wko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WKK_01970
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WKK_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
AEJ23268
LinkDB
All DBs
Position
complement(405114..405647)
Genome browser
AA seq
177 aa
AA seq
DB search
MNFIAMDFETANAKRYSAVSIAVVVVRDDQVVNEFYSLLKPPTDFSQQNINIHGIHPQDV
ADAPQFPLVWQKIQQFYTGEQLVVAHNAAFDNSVLKATLEYYHLPTPHYLSLDTVKTSRR
LYPQLTNHKLNTVAEALEIPLHHHHHALDDTLAAAQILLKQSQEFGVDPLKSLVKVI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttattgccatggattttgaaacggcaaatgccaaaagatatagtgccgtgtca
attgcggtggtggtagtccgtgatgatcaagttgtgaatgagttttattctttactaaaa
ccaccgactgattttagtcagcaaaacattaacatccatgggattcatccgcaagatgta
gcagatgctcctcaattcccattagtgtggcagaaaatacagcaattttatactggtgaa
caattagtagttgcccataacgcggcgtttgataacagtgttttaaaagcaactttggaa
tattatcacttacctacaccacattatttgtcacttgatacggttaaaacgtcacgtcgg
ttgtacccacaactaactaatcataaattaaatactgtggccgaagcattggaaattcca
ttgcatcaccatcaccacgccttagacgatactttggcggcagcacaaatcttattgaaa
caatctcaagaatttggggttgatccacttaagagtttagtaaaagtaatttag
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