Weissella koreensis: WKK_03880
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Entry
WKK_03880 CDS
T01577
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
wko
Weissella koreensis
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wko03032
]
WKK_03880
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_03880
Enzymes [BR:
wko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
WKK_03880
DNA replication proteins [BR:
wko03032
]
Prokaryotic type
DNA Topoisomerases
WKK_03880
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WKK_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AEJ23650
LinkDB
All DBs
Position
787968..790535
Genome browser
AA seq
855 aa
AA seq
DB search
MTEEIAQNDGRISNAPLSAQMKNSFLNYAMSVIVARALPDVRDGLKPVHRRILYGMHELG
VTPDKQHKKSARIVGDVMGKYHPHGDSAIYEAMVRMAQDFSYRNMLVDGHGNFGSIDGDP
AAAMRYTEARLSKIAVEMLRDINKDTIDFVDNYDGTDREPTVLPARFPNLLVNGVTGIAV
GMTTNIPPHNLGEVINGLHMLMNNPEITTTELMEAIPGPDFPTGAIVMGKAGIRRAYETG
EGKVTVRAKVEIETDKSGREKIVVTELPYMVNKARLIQRIVELARDKRVEGISGANDESD
REGYRIAIDVRRDASASVVLNNLYKNTLLQTTYNFHMLAVKNGEPKLMGIKEILVSYLEH
QQNVIRRRTKFELKKAEARAHILEGLRIALDHIDAIISIIRNSKTAEIAKDRLINEYSLS
DKQSQAILDMRLVRLTGLERDKIEGEYQALMTQIADLKDILANQSRLDQIIYEELLEIQA
KHGDARRTELQIGDVTNLEDEDLIEEEEIVVTLTNGGYIKRVPTSEFRAQNRGGRGVQGM
GLNDDDYIDQLIGTSTHDTLLFFTSLGKVYRMKGYEIPEYGRTAKGIPVINLLGKLDYNE
QVTKIINVRGDTAESNDYLFFVTQQGVVKRTSVSEFGNIRTNGLKALTLHDEDELIAVLT
SDGEQEIFIGTHDGYSVSFSETNVRSMGRSAAGVRGIRLREGDYVVGADVRHDGDEVLVI
TENGYGKRTSVSEYPVKGRGGKGIKTANITDKNGSLVGISIVSGDEDVMLTTDQGVMIRF
TVDSVSQTGRATQGVRLMRLGSETKVATFTKMDAEEVVEVNDDEENQVGSVTDNTNDEIG
TDAVNKLLDRAETDQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaatagcacaaaatgacgggcggattagtaatgccccattaagcgcgcaa
atgaagaattcatttttgaattatgccatgtcagttattgtggcgcgagcattgcctgac
gtacgagatggattgaaacccgttcatcgtcgtattctatatggaatgcatgaattaggg
gtgaccccggataaacaacataaaaagtcagctcgtattgttggggatgttatgggtaaa
tatcatccacacggtgattcagcaatttatgaagcaatggttcgaatggctcaagatttt
agctatcgaaatatgttagttgatgggcatggaaattttggatcaattgatggagaccca
gctgccgctatgcgatataccgaggctcggttgtcaaaaattgcagttgaaatgttacgt
gatatcaataaagatacgattgattttgtagataactatgatggaactgatcgtgaacca
actgttttaccagcacgtttccctaatttattggttaatggagtgactggaatcgcagtt
ggaatgactaccaatattccaccacataatttgggtgaagtaattaatggacttcacatg
ttgatgaataatccagagattacaacaactgaattgatggaagcaattcctggtcctgat
ttcccaactggggcaatcgtaatgggaaaggctggaattcgtcgagcttatgaaactggt
gaaggtaaagtaaccgttcgagctaaggtggaaattgagacagataagagtggacgtgaa
aaaattgtagtgactgagttgccttatatggttaacaaggctcgtttgattcaacgaatt
gttgaattagcacgggacaagcgagttgaaggtatttctggagcgaacgatgaatctgat
cgtgaaggttatcggattgcaattgatgttcgtcgagatgcttcagcttcagtagtctta
aacaatttgtacaagaatacccttttgcaaaccacttataatttccatatgttggcggtt
aaaaatggtgagccaaagttgatgggcataaaagaaattttagtttcatacttggagcat
caacaaaatgttattcgtcgtcgaacaaaatttgaattgaagaaagctgaagcgcgtgcg
catatcttagaaggtttgcggattgcacttgatcatattgatgctattatttcaattatt
cgcaattcaaagacagcagaaattgctaaagatcgtttgatcaatgaatattcactttct
gataagcagtcacaagcaatcttagatatgcgtttggttcgattgactggcttagaacgc
gataagattgaaggcgaatatcaagctttgatgactcaaattgctgatttgaaggatatt
ttggctaatcaatctcggttggatcaaattatctatgaagaattacttgaaattcaagct
aagcatggtgatgcccgtcgaacggagttacaaattggggatgttacaaaccttgaagat
gaagatctaattgaagaagaagaaatcgtggtaactcttacgaatggtggctacattaag
cgagtcccaacttctgaatttagagcacaaaatcgaggtggtcgtggagttcaaggaatg
ggtctgaacgatgatgattatattgaccaattaattgggacttcaactcacgatacgctt
ctcttctttacaagcttaggtaaggtttaccgaatgaagggatatgaaattcctgagtat
ggtcggacagccaaaggaattccagttattaatttgttaggtaaattagattataatgag
caagttaccaagatcattaatgtccgaggtgacaccgctgaatcaaatgattatctcttc
tttgtgactcaacaaggtgtggttaagcgaacttcagtatcagaattcggtaatatccgt
acaaatggtttgaaagccttaactctccatgatgaggatgaattgattgcagtcttaact
agtgacggcgaacaagagatctttattggaactcatgatggatattcagtttcatttagt
gaaactaatgttcgttcaatgggtcgttcagcggccggagttcgtgggattcgtttacgt
gaaggtgattatgttgttggagcggatgtacgtcatgatggcgatgaagttctagtaatt
actgaaaatggttatggtaagcgaacttcagtatcagaatatcctgttaagggtcgtggc
ggtaaaggaattaaaactgctaatatcacagataaaaacggatcattagtgggaatttca
attgtttctggtgatgaggacgtgatgctaacaacagatcaaggggttatgattcgattc
accgtcgattcagtttcacaaaccggtcgagctacgcaaggagtacgattgatgcgtttg
ggatctgaaactaaggttgctaccttcacaaagatggatgctgaagaagtggttgaagtt
aatgatgatgaagaaaatcaagtaggatcagttacggataataccaatgatgaaattgga
actgatgctgttaataaattattagatcgagctgaaactgatcaataa
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