Weissella koreensis: WKK_06120
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Entry
WKK_06120 CDS
T01577
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wko
Weissella koreensis
Pathway
wko03420
Nucleotide excision repair
wko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WKK_06120
03430 Mismatch repair
WKK_06120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_06120
Enzymes [BR:
wko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WKK_06120
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WKK_06120
MMR (mismatch excision repair)
Other MMR factors
WKK_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DUF6354
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEJ24094
LinkDB
All DBs
Position
1285583..1287892
Genome browser
AA seq
769 aa
AA seq
DB search
MSQEMLRGMNPQQAEAVTTTEGPLLIMAGAGSGKTRVLTHRVAHLIKDKNVAPWRILAIT
FTNKAAREMKERIADLIGAEDADRVWVSTFHAMAVRILRRDIDKLGYKRDFTIIDAGTQR
TLVKRILKDQNVDIEKFDPRSVLSAISNAKNAMETPVDYAKTANDLFGKIVAKAYAAYQK
QLGLSQSVDFDDLIMLTIELLEQEPEVLQYYQDKFQYIHVDEYQDTNDAQYRLIQLLADG
WKNLAVVGDSDQSIYGWRGANLEIILNFEKDYVGAKKVLLEQNYRSTQTILNAANEVIAN
NNGRITKNLWTENGDGEKITYHRSNSDRDEAVYILGEIANQVKNEKRQYRDFAILYRTNA
QSRGIEEALVKANIPYTMVGGSKFYDRKEIRDILAYFSLLTNPADDESFLRVVNEPKRGL
GDTSIIKLRAFASEHNWPLLEAAANANLMNDLQSRAQNKFMDFAALMQNLIQQEQFDVSI
TDLARVIYKETNYVETLKASPTPENENRLENLDEFLTVTEQFDKNYVPDEESVSKYVDFM
SELALVSDIDNVDEDDNNVTLMTLHAAKGLEFPVVFLVGMEESIFPSFRAIIDPKQLDEE
RRLAYVGITRAKEKLYLTNAYTRMLYGKMNNNMPSRFIDEISPKYLDLSTVGQLDSYRAR
EASLPFAQRTQSVTGTTFQGRQAQPNQRTNSSTSRNLTSTRQVHQAPNNTTSDEQSNWAV
GDLVSHKKWGTGTVVKVNGLGENMELDVAFASQGIKRLLAAFAPIKKQS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaatgttaaggggcatgaatccacaacaggctgaggctgtgacgacaacg
gaaggtccgttgttaattatggctggggcgggatctggtaaaactcgggttttaacacat
cgggttgcacatttaattaaagacaaaaatgtggcgccttggcggattttggctattact
tttaccaataaggctgcacgagaaatgaaagaacggattgctgatttaattggggctgag
gatgctgatcgagtttgggtttcgacttttcacgccatggccgttcgaattttacgacgc
gatattgataaattaggttataaacgtgattttacgatcattgatgccggaactcaaaga
acgctggttaagcgaattttaaaagatcaaaatgttgatattgaaaagtttgaccctcgg
agtgttttgagtgcaatttcaaatgctaaaaatgccatggaaactcccgtcgattatgct
aaaacggctaatgacctatttggtaaaattgtggcgaaagcctatgctgcttatcaaaaa
caattaggcttatctcaatctgtggattttgatgatttaattatgttgacgatcgagctc
ttagaacaagaaccagaagttttacagtattaccaagataagttccaatatattcatgtc
gatgagtatcaagatactaatgatgctcaatatcgattaattcaattattggctgatggt
tggaaaaatttagctgttgtaggtgattctgatcagagtatttatggatggcgtggtgct
aatttagaaattattttgaatttcgaaaaagattatgtaggggctaaaaaagtccttttg
gaacaaaattatcgttcgactcaaacgattttaaatgcagctaatgaggtaattgctaat
aataatgggcgaattactaaaaatttgtggactgagaatggtgatggtgaaaaaataact
tatcatcgttcaaattcagaccgagatgaggctgtttatattttaggtgaaattgcgaat
caagttaaaaatgagaaacgacaatatcgagactttgcaatcctttatcggacaaatgcc
caatcacgtgggatagaagaggcgttagttaaagctaatattccatatacaatggttggt
ggttcaaaattctatgatcgaaaagaaattcgtgatattttagcgtacttctcactcctt
acgaatcctgctgatgatgaaagctttttacgagtagtcaatgaacctaaacgggggctt
ggtgatacgtcaattattaagttacgggcatttgctagtgagcataattggcctcttcta
gaggcagcggctaatgctaatttaatgaatgatttacaaagtcgggcgcaaaataaattt
atggattttgcagcattgatgcaaaatctaattcaacaagaacaatttgatgtttcaatt
actgatttagcacgggtgatttataaagaaacgaattatgtggaaacattaaaagctagt
cctacgcctgaaaacgaaaaccgtttagaaaatttggatgaatttttgacggtgaccgaa
caatttgataaaaattacgttccagatgaagaaagcgtttctaaatatgtagactttatg
agtgaattggctttggtttccgatattgataatgttgatgaggatgataataatgtaacc
ttgatgactttgcatgcagccaaagggcttgaatttccagttgtctttttggtagggatg
gaagaatcaattttcccatcattccgggctattattgatccaaaacagttggatgaagaa
cgtcgtctggcctatgttggtattactcgggctaaggaaaaactttatttgacaaacgct
tacacacgcatgctttacggtaagatgaataacaatatgccttcacggtttattgatgaa
atttcaccaaaatatttggatctttccactgtaggtcagttagatagttatagagcgcgg
gaagctagtttaccttttgcacaacgaacgcaatcagtaactggtacaacctttcaagga
cgtcaggcccagcctaatcaaagaacaaattcaagtacaagccggaatttaacttcaacg
cggcaagtacatcaagcaccaaataatactacatctgacgaacaatccaactgggcggtt
ggtgatttggtttctcataaaaagtggggaactggaacagttgttaaggttaatgggttg
ggtgaaaatatggaattagatgttgcctttgcatcacaaggaattaaacgactattggca
gcatttgcacccatcaaaaagcaaagctaa
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