KEGG   Weissella koreensis: WKK_06255
Entry
WKK_06255         CDS       T01577                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
wko  Weissella koreensis
Pathway
wko03030  DNA replication
wko03430  Mismatch repair
wko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WKK_06255
   03430 Mismatch repair
    WKK_06255
   03440 Homologous recombination
    WKK_06255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wko03032]
    WKK_06255
   03400 DNA repair and recombination proteins [BR:wko03400]
    WKK_06255
Enzymes [BR:wko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WKK_06255
DNA replication proteins [BR:wko03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     WKK_06255
DNA repair and recombination proteins [BR:wko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     WKK_06255
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF2853 tRNA_anti_2 LRV_2
Other DBs
NCBI-ProteinID: AEJ24121
LinkDB
Position
1318788..1322159
AA seq 1123 aa
MVPLNVRSAYSLLKSPMLPNVYTEYAKYLGYSAVGLADEQNLYAMVNFYQQAKKNGLTPI
LGITIEAQGLINKGMTFPLHVYVQNEAGYQNLLILASQQRTQQKALDLTTLTQQNHLSGL
LIVIPPTSELSLNLMNDFNQGRLLIDRFKILLNSAQLWLGIDLQMDAELLRAETKLSQEM
NVPLLAFDEIRYAKSQDHFAYKVLTYLKAGETITNVGAAKKESGEQALRQRDDWYQSYVD
SGLQSAADETDVLAKKVDFTLPQRKIELPRFYESKQEAKQKLLKLTQSGLESLAISSIQY
HQYQERLEYELKIIDELDFDDYFLIVWDVINFAKTHEIMTGPGRGSVAGSLVAYCLGITE
VDPIAYDLLFERFLNPKRAQMPDIDIDIPDNKREVVLDYLHTKYGHDKIAQIITFSTMGM
KQSLRDVARVFGLKPTEIDKLARSLPKDAINLEEAYQKSQSFQNEILDLPVDGDLLWKTA
LQLTGIPRNSSLHAAGVVIANNPLVESIPVQLGEDGRLVTQLTKNPVEQLGLLKIDFLAL
SNLNILAIALREVHKIEPTFDLKTIDLNDPETLALFGLGQTNGIFQFESNGMKQMLQQMK
PDQFNDLVAANALYRPGPMANIPHFIARKHQQEMIPKIAETIDQLLAPTYGVIVYQEQVM
RVAEEFAGFSLAEADLLRRAISKKDTIQMEKVKKQFLTGAQKLGQSDLVAEEVYQYIERF
GSYGFNKSHAVAYSKLAFELAFLKVHYPLAFYKAVLNLEISNQDKVRIYINEARMRGVKV
LGPQINQSFSGYSVTNDYLQMGLASIKGLRKDFRDHLIFSRQTNGPFKNLGDLLLRIDQP
FRQMKFLEPLIMAGGLDALQPNRRMVSFILPGYLDAVQLAGNSLDLLNRLKPKQVVMDDY
TKIEKLNQEFAVLGIYLSGHPLEKIIQEVDSSVYTNVSELIAGQNGVKLILMIDKVKVIR
TKKGTQMAFVDTTDLTGKLSLTVFPKQYQQYQTHLVNGGLIAVYGNVEYQRNQIDLQVVV
DQMIPANSLIQNDKQAGVEKISQGIWYIRPHVWPIPEARLKNLAQIAQNHPGANVVILIN
PKNKKQALKLSSGYQLSAGLEVEQKLVRIFGQQNISFKAVKVD
NT seq 3372 nt   +upstreamnt  +downstreamnt
atggtgccattaaatgttcgaagtgcgtatagtttattaaaaagtccgatgctacctaat
gtatatactgaatatgctaaatatttaggttattcagccgtgggtctagctgatgaacaa
aatttatatgcaatggttaatttttatcaacaagctaaaaagaatggtctaacacctatt
ttaggaataactattgaagctcaaggcttaatcaataagggcatgacttttcctctgcat
gtatatgttcaaaatgaagcaggttatcaaaatttattgatactagctagtcaacaacga
acacagcaaaaagctttagatttaacaactttaacgcagcaaaatcatttatctggactt
ttaattgtgatcccaccaacaagtgagttgtcacttaatttaatgaatgattttaatcaa
gggcgtctattaattgatcggtttaaaatattactaaatagcgcacaactttggcttgga
attgatttacagatggatgctgaattattgagagcagaaactaaactaagtcaagaaatg
aatgtgccattactggcctttgatgaaattagatatgcaaaatcacaagatcattttgca
tataaggttttaacctatttaaaagctggtgagaccattactaatgtgggtgcggctaaa
aaagaatcaggtgaacaagccttaaggcaaagggatgattggtaccagtcctatgttgat
tcaggacttcaaagcgcggcggatgaaacagatgttttggcaaaaaaagttgactttaca
ttgccacaaagaaaaattgagttacctcgtttttacgaaagtaagcaagaagccaaacaa
aagttattgaaattaactcaatcagggcttgaaagtttagcgatttcatcaattcaatat
catcaatatcaagaacgtttagagtatgaattgaaaattattgacgagctagattttgat
gattattttttaattgtttgggatgtaattaattttgcaaaaacccatgagattatgact
ggacccgggcgcggatcggtagcgggttctttggtggcatattgtttaggcattacggaa
gtagatccgattgcttatgatctattgtttgaacgttttttaaatcctaaacgagcacaa
atgccagatattgatatcgatattccggataataaacgagaagtagtcctagactattta
catacaaaatatgggcatgataaaattgcgcaaattattactttttcaacgatggggatg
aagcaaagtttacgggatgtagctcgagtgttcggacttaaaccaactgagatcgataaa
ttagcacgcagcttgcctaaagatgctattaatttagaagaagcttatcaaaaatcacaa
agtttccaaaatgaaattttagatcttcctgttgacggagatttattgtggaaaacagcc
ttacagttaacaggaataccgcgaaacagttcgttacatgcggctggagtagttattgcg
aataatcctttagtggagtctattccagtacaattaggtgaggatggacgcttagtgacc
caattaacgaaaaatccggtagagcaattgggtttgttaaaaattgattttctggcatta
tctaatttgaatatcttagcgatcgcattgcgagaagtacacaaaattgaaccaacgttt
gatttgaaaacaattgatttaaatgatccagaaacattagctttatttggccttggtcaa
acaaatggtatctttcagtttgaatcaaatgggatgaaacaaatgttgcagcagatgaaa
ccagatcaatttaatgatttagttgcggctaatgctctatatcggcccggtcccatggcc
aatattccacattttattgcgcggaagcatcaacaagaaatgattcctaaaattgcggaa
actattgatcaactattagcaccaacttatggggtaattgtgtatcaagaacaggtgatg
cgcgttgccgaagaatttgctggatttagtttggctgaagccgatttgttacgtcgtgca
atttctaaaaaagataccattcagatggaaaaagttaagaaacaatttttgacaggagct
caaaaactgggtcaatctgatttagtagctgaagaagtctatcaatatattgaacgattt
ggatcatacggatttaataaatcgcatgcggttgcatattctaaattagcttttgaattg
gcctttttaaaggtacattatccgttggctttttataaagcagtcttgaacttagaaatt
agtaatcaagataaggtgcgtatttatataaatgaggctcgaatgcggggcgttaaagtt
ttaggaccgcaaattaatcagagcttttctggttactccgtgacaaatgattatttacag
atgggtctagctagcattaaaggtttgcgtaaggattttcgtgatcatttaattttttca
cgtcaaacgaatggaccatttaagaacttgggtgatttattattacgaattgatcaacct
tttcggcaaatgaaatttttggaacccttgattatggcgggagggttagatgctttacaa
cccaatcgaaggatggtaagtttcatcttacctggatatttagatgcagtacaactggct
ggtaattcattggatttattgaatagattgaaacctaaacaagtagtaatggatgattat
acgaaaatcgaaaaattaaatcaagaatttgcagttcttggaatttatttaagtgggcat
cctttggaaaaaattattcaagaagttgattctagtgtttataccaatgtaagtgagttg
atagcaggtcaaaatggggtgaaacttattttgatgatcgataaggttaaagtaattcgg
actaaaaaaggaactcagatggcatttgttgatacaacggatttaacaggaaagttatca
ttaaccgtttttccaaaacaatatcagcaatatcagactcatttagttaacggcggattg
attgctgtttatggaaatgtggagtatcaaagaaatcaaattgacttacaagttgtggtt
gatcaaatgatcccagccaatagtttgattcaaaatgataagcaagcaggggttgagaaa
attagtcaaggaatttggtatattcggccccatgtttggccaattccagaagcaagactt
aaaaatcttgctcaaattgcacaaaatcatccaggggcgaacgtagtaatattaataaat
cctaaaaataaaaaacaggcccttaaattatctagtggttatcaattatcagctgggctt
gaagtagaacaaaaattagttcgaatttttgggcaacaaaatatttcatttaaagcagtg
aaggttgattaa

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