Weissella koreensis: WKK_06425
Help
Entry
WKK_06425 CDS
T01577
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
wko
Weissella koreensis
Pathway
wko02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WKK_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wko03021
]
WKK_06425
Transcription machinery [BR:
wko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WKK_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
WH_Rok
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AEJ24155
LinkDB
All DBs
Position
1357713..1358846
Genome browser
AA seq
377 aa
AA seq
DB search
MPKKVEQTDVDFDQKGFDKAIKDLVKEYKKSTTIKEDELHETLVKRWNLNANQIDELYDK
VEAAGIAIVDEQGEPAMRALNNKKTALSEKELKQAAEAPSGIKINDPVRMYLKEIGRVSL
LTGPEEVALAERIEEGDASAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKA
VEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRSLLSDLG
REPTPEEIGAEMDIATEKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDNEAVSPADSA
AYQMLKEQLESVLDTLTDREENVLRLRFGLEDGRTRTLEEVGKVFGVTRERIRQIEAKAL
RKLRHPTRSKQLRDFLD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaaagtagagcaaactgatgtagattttgatcaaaaaggttttgacaaagcg
attaaggatcttgtaaaagaatacaaaaaatcaacgacaattaaagaagatgaattgcat
gaaacattggttaaacgttggaatttaaatgctaaccaaattgatgaactatatgataag
gtcgaagcagctgggattgccattgttgatgaacaaggtgaaccagctatgcgtgctttg
aataataaaaagacggctttaagtgaaaaagaattaaagcaagcagctgaagcaccatct
gggattaaaattaatgatcctgtacgtatgtatttaaaagagattggccgtgttagctta
ttgacaggtccagaagaagttgcattggccgaacgtattgaagagggtgatgcatctgct
aagcaagaattggctgaggctaatttgcgtttggtggtttcaattgcaaaacgttatgtt
ggtcgtggaatgcaattcttggatttgattcaagaaggaaatatgggcttgatgaaggca
gttgagaagttcgattaccgtaaggggttcaaattttcaacttatgccacatggtggatt
cgtcaagcgatcactcgcgcaattgccgaccaagctcgtacaattagaattccagtgcat
atggtggaaacgattaataaattaatccgaatccaacgatcattgctttctgatttggga
cgagaaccaactcctgaggaaattggggctgagatggatattgcgacagaaaaagttcgt
gatattcttaaaattgcgcaagaaccagtttccttagaaacgccaattggtgaagaagat
gattcacatctaggtgatttcattgaagacaatgaagctgtttcaccagctgattccgcc
gcatatcaaatgttgaaggaacagctagaatcagtactagatactctaactgatcgtgaa
gagaacgtcttacgtttgcgctttggattagaagatggccggactcgaacattagaagaa
gttggtaaagtctttggtgtgacgcgagaacgaattcgtcaaatcgaagccaaggcgctt
cggaaacttcgccatccaacgcgttcaaagcaattacgtgatttcttggactaa
DBGET
integrated database retrieval system
