Wenzhouxiangella marina: WM2015_1270
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Entry
WM2015_1270 CDS
T04011
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
wma
Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wma03016
]
WM2015_1270
Enzymes [BR:
wma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
WM2015_1270
Transfer RNA biogenesis [BR:
wma03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WM2015_1270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AKS41644
UniProt:
A0A0K0XVA8
LinkDB
All DBs
Position
complement(1542190..1543326)
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AA seq
378 aa
AA seq
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MSHLRPSATPSASTLELARQATEQARFLAPEEGLSGPASRWTQARVIGLDTEFVRERTFY
PRPGLIQIHDGQETWLIDPIGREDVTALTELMNDPDSIKVFHSVGEDLEIMQLVAGAVPS
PLFDTQIAAAMLGFPLQCRYEVLVQECFGVELAGGQARSDWCKRPLSATLLHYAASDVVW
LPELQALLEKALEKAGRLGWLQEDCQRLVDAARNGDEKVPLLRVKGAGRLDELGLGWLDR
FSTWREQQCRKRDLPRSFVLRDEVLVDIAERAARGQTIEALDALPPRERRRYGNELEALL
QDTPQPITRPLELIRLEPKQRDAIKAAQAEVRRIAEELGVDPALLASKRELTRLLFGERP
DWADGWRGEWIGHLGPEA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcttcggcccagcgccacgccgagcgcttcgaccctcgagctcgcccgacaa
gccaccgagcaggcccgttttctggcgccggaggagggcctgagcggcccggcgagccga
tggacgcaggccagagtcattggcctggacaccgaattcgtgcgcgagcgcaccttctac
ccacgcccggggctgattcagatccatgacggccaggagacctggttgatcgacccgatc
ggccgcgaggacgtgaccgcgctgaccgaactcatgaacgacccggactcgatcaaggtc
ttccacagcgtgggcgaagacctggagatcatgcagctggtcgcaggggccgtcccttcg
cccctgttcgacacgcagatcgccgccgccatgctgggcttcccgctccagtgccgctac
gaagtactggtccaggagtgcttcggcgtcgaactggccggcggccaggcgcgatcggac
tggtgcaagcgcccgctgtccgccacgctgctgcactacgccgccagcgacgtggtctgg
ctgccggaactgcaggccttgctggaaaaagcgctggagaaggccggtcgactgggctgg
cttcaggaagactgccaacgcctggtggacgccgcacgcaatggcgatgagaaagtccca
ctgctcagggtcaaaggcgcaggccgcctcgacgagctcggactgggctggctcgaccgc
ttctcgacctggcgggagcaacaatgccgcaagcgcgatctgcctcgcagcttcgtcctg
cgcgatgaggtcctggtcgacattgcagagcgcgccgctcgcggtcagacgatcgaggcg
ctcgatgcgctaccgccgcgcgaacgccgtcgctacggcaatgagcttgaagcgctgctc
caggacactccacagccgatcacacggcccctggagctgatccgcctggaaccgaagcaa
cgcgatgcgatcaaggccgcacaggccgaagtgcgacggattgccgaggagctcggcgtc
gaccctgccctgctcgccagcaagcgcgaactgacccggctgctgttcggcgaacgcccc
gactgggccgacggctggcgaggcgaatggatcggccatctggggccggaggcatga
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