Wenzhouxiangella marina: WM2015_1351
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Entry
WM2015_1351 CDS
T04011
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
wma
Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wma03009
]
WM2015_1351
Enzymes [BR:
wma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
WM2015_1351
Ribosome biogenesis [BR:
wma03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WM2015_1351
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
PCMT
RrnaAD
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
Methyltransf_23
PrmA
UvdE
Motif
Other DBs
NCBI-ProteinID:
AKS41723
UniProt:
A0A0K0XVM2
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All DBs
Position
1623722..1625050
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AA seq
442 aa
AA seq
DB search
MARRRRRKLPSEPIEVQITDLAHDGRGVGRVEGKAVFVHGALPGETVRARVIDRARKHDE
ALTEEVLIASGDRVEPGCPWFDQCGGCALQHLSSEAQRAWKHKRLVDNLERIGEVSPERW
LDPIADEPWHYRRRARLSARFVKGKGRVLVGFREPQGRFVADVGHCRVLHPAFSDRLESL
SELLGSLSVAASVPQVEIAAGDGQAAMVLRHLEPLTPDDLMRLKSWSEAEGVAVYLQSKG
PDTVHRLCPDEHQLSYRLEAHDLALNFHPQQFVQVNATVNARLIDRAIELMELQGHERVL
DLFCGLGNFSLPLARRAEHVTGIEGLEDLVESARANAALNGIDNVEFEVADLTEDVRDRA
WYRAGFDAVLIDPPRSGALEILPLMADCGAKRLVYVSCNPATLARDAGELVRRHGFVLRA
AGIADMFPHTAHVESIALFERA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggcgccgccgcaaactaccaagtgaaccgatcgaggttcagatcaccgac
ctggcgcacgatggccgcggggttggacgagtcgaaggcaaggccgtcttcgtccacggc
gcactgccgggcgagaccgtccgcgctcgcgtgatcgatcgtgcgcgcaagcacgatgag
gcactgaccgaggaggtgctgatcgcttccggagaccgggtcgaacccggttgtccctgg
ttcgatcagtgcggaggttgcgcgctccagcatctgtcttccgaggcccagcgagcctgg
aagcacaagcgcctggtcgacaatctggagcgcatcggtgaagtcagccccgagcgctgg
ctggacccgattgccgatgagccctggcattaccggcgccgtgcccgtctgagtgcgcgc
ttcgtcaagggcaagggccgtgtcctggtcggttttcgcgagccgcaagggcgtttcgtg
gccgacgtcggtcactgtcgcgtcctccatccggctttcagtgatcgactggagtccttg
tccgaactgctcggcagcctgtcggtggcggcgagcgttcctcaggtcgagatcgccgcc
ggtgatggacaggctgccatggtgctgcgtcacctcgagcccctgacgccggatgatctg
atgcgacttaaatcctggtccgaggccgagggcgtggcggtctacctccagtcgaagggc
ccggacacggtgcatcgtctctgccccgacgagcatcagctcagctatcgcctcgaagcc
catgacctggcgttgaattttcacccgcagcagttcgtgcaggtcaacgcaaccgtcaac
gcccggctgatcgatcgcgccatcgagctgatggaactccaggggcatgaacgggtgctc
gatctgttctgcggcctgggcaacttcagcctgcccctggcccgacgcgctgagcacgtg
accggcatcgaggggctcgaggacctcgtcgagtcggcgcgggccaacgcggcgctgaac
gggatcgacaacgtcgaatttgaagtggcggatctcaccgaggacgttcgcgaccgcgcc
tggtatcgcgccggcttcgacgccgtactgatcgaccccccgcgctcgggcgcgctcgag
atcctgccgttgatggccgattgtggtgccaagcgcctggtctacgtcagctgcaacccg
gccaccctcgcgcgggatgccggcgaactggttcgccggcacggcttcgtgctgcgcgcg
gccggcatcgccgacatgttcccgcacacggcgcacgtggaatcgatcgccctgttcgag
cgggcttga
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