Wenzhouxiangella marina: WM2015_159
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Entry
WM2015_159 CDS
T04011
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wma
Wenzhouxiangella marina
Pathway
wma03420
Nucleotide excision repair
wma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WM2015_159
03430 Mismatch repair
WM2015_159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_159
Enzymes [BR:
wma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM2015_159
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WM2015_159
MMR (mismatch excision repair)
Other MMR factors
WM2015_159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DUF3553
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKS40548
UniProt:
A0A0K0XS86
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All DBs
Position
complement(199454..201616)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSHLLDQLNDAQREAVTADEGHVLVLAGAGSGKTRVLVHRIAWLIQVHHVSPMGLLAV
TFTNKAAGEMRHRVGKLLNLRPDGLWIGTFHGICHRMLRMHAAEVGLPETFQILDSDDQY
RLIRRVIRDMELDEGEFPARQMQGFINHHKEEGRRPGDIECFDHAFQARQLAIYQHYQDY
CERSGLIDFAELLLRTLELLRDSDARRAHYQDRFGHILIDEFQDTNTLQYALVRLLAGSK
NQLFVVGDDDQSIYGWRGAKVENVVHFDRDFSPKVVRLEQNYRSTATILEAANRVIDHNA
ERMGKNLWTEGEKGEALKLFTAFNAEEEAEFVIARIQDWMEQGGRASETAILYRSNAQSR
LFEQVLLREEIPYRVYGGLRFFERAEVKDAMAYLRLVHNPHDDPAFERVINLPARGIGER
TVALIRDHARRQGQSLFEAARSLCESGGFTARAGNAVAGFLALIGELTDEYGQAGLGEAM
QAAIDRAELADWYRSREPADRAEAREENLAELVRAAESFTQPFEDEQAGLSPTASFLAQA
ALEAGEHQGERWQDCVQLMTLHSAKGLEFPLVFMAGMEEGLFPHQKSAEEPGRLAEERRL
CYVGMTRAMQQLVLSHAESRMIHGQTNFSRPSRFLSEIPAELVEELRPGRPRVAPAQSHG
GAPQDAEGLSLGTTVRHPRFGLGTVVTIEGQGANARIQINFESAGSKWLVLGYASLERVG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcccacctgctcgaccagctcaacgacgcccagcgcgaggcggtcacggcc
gatgagggccatgtgctggtgctcgccggcgccggctcgggcaagacccgggtcctggtc
caccgcatcgcctggctgatccaggtccaccacgtctcgccgatgggcctgctggccgtg
accttcaccaacaaggcggccggcgaaatgcggcatcgcgtcggcaagctgctcaatctg
cgtcccgacggactgtggatcggcacctttcacggcatctgccatcgcatgctgcggatg
cacgccgctgaagtcggcctgcccgaaaccttccagatcctggattcggacgatcagtac
cgactgattcgccgggtgatccgggacatggagctggatgaaggcgagtttcccgcgcgc
cagatgcagggcttcatcaaccaccacaaggaagagggtcgtcggccgggcgacatcgag
tgcttcgatcacgcctttcaggcgcgccagctggccatctaccagcattaccaggactac
tgcgagcgctcgggcctgatcgacttcgccgaactgctgctccgcaccctcgagctgctg
cgcgacagtgacgcccgtcgcgcccactaccaggaccgtttcggccacatcctgatcgac
gagttccaggacacgaacaccctccagtacgcgctggtgcgcctgctggcgggctcgaag
aaccagctcttcgtggtcggcgacgacgatcagtcgatctacggctggcgcggcgccaag
gtcgagaacgtggtccacttcgaccgcgatttctcgccgaaggtggtccgcctggaacag
aactatcgctccacggccacgattctcgaagcggccaaccgggtcatcgaccacaacgcc
gagcgcatgggcaagaacctctggaccgagggcgagaagggcgaagcgctcaagctgttc
acggccttcaacgccgaagaagaggccgagttcgtgatcgcccgcattcaggactggatg
gaacagggcgggcgcgcctcggaaaccgccatcctgtatcgctcgaacgcgcaatcccgg
ctgttcgagcaggtgctgttgcgcgaagagattccctaccgggtgtacggcggcctgcgc
ttcttcgaacgcgccgaagtcaaggacgccatggcctatctgcgtctggtccacaatcca
cacgatgacccggccttcgagcgcgtcatcaacctgcccgcccgcggcatcggcgagcgc
accgtggcgctgatccgtgaccacgctcgccgccagggccagtccctgttcgaggccgcg
cgaagcctgtgcgagagcggcggcttcaccgcacgcgccggcaacgcggtggccggcttt
cttgccctgatcggcgagttgaccgacgagtacggacaggccggcctcggggaggccatg
caggcggccatcgaccgcgccgaactggccgactggtaccgctcccgcgagcccgccgat
cgcgccgaggcgcgggaggagaacctggccgaactggtccgcgccgccgagagcttcacc
cagcccttcgaagatgagcaggccggcttgagcccgaccgcctccttcctcgcccaggcc
gccctggaggcgggcgaacatcagggcgagcgctggcaggactgcgttcagctgatgacc
ctgcactcggccaagggtctggagtttccgctggtcttcatggcaggcatggaagaaggc
ctgttcccgcaccagaaatccgccgaagagccgggccgcctggccgaagaacggcgcctg
tgctacgtcggcatgactcgagcgatgcagcagctggtgctgagccacgcggaatcgcgg
atgatccacggccagaccaatttctcccgaccttcgcgattcctgtccgagatcccggcc
gaactggtcgaggaactgcgcccgggacgcccacgcgtggccccggcccagagccacggt
ggcgcaccgcaggacgccgaaggcctttccctgggcacgaccgtccgccatccccgcttc
gggctcggcactgtcgtcacgatcgaaggccagggcgcgaacgcgcgcatccagatcaat
ttcgagtccgccggttcgaaatggctggtgcttggctatgcctccctggagcgggtcggg
tga
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