Wenzhouxiangella marina: WM2015_1965
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Entry
WM2015_1965 CDS
T04011
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
wma
Wenzhouxiangella marina
Pathway
wma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WM2015_1965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_1965
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WM2015_1965
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WM2015_1965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Kinesin
AAA_16
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AKS42331
UniProt:
A0A0K0XXJ5
LinkDB
All DBs
Position
complement(2340689..2342743)
Genome browser
AA seq
684 aa
AA seq
DB search
MGIPPAALPDNYSMTRRFRMASSYEPAGDQPTAIQALVDSLNAGNSHQTLLGVTGSGKTF
TMANVIERVQRPALVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSTDT
FIEKDASINEHIEQMRLSATKALLERPDAVIVATVSAIYGLGDPSSFLKMTLPLKVGERI
SQREILRRLAEMQYSRNDFELRRGTYRVRGELIDLFPGDSEMEAVRVELFDDEIERISHF
DPLTGELHGKVDELTVFPKTHYVTPRQVVLDAIEAIKAELKERLAQLEGAGKLLEAQRIK
QRTQFDIEMMMELGYCQGIENYSRHLTGRQPGDPPPTLFDYLPSNAILIADESHVTIPQI
GGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEARAPQMILVSATPRSWELERSPVV
AEQVVRPTGLIDPEVEVRPVDTQVDDLLSEIRERVGDGDRVLVTTLTKRMAENLTEYLSE
HDVRVRYLHSDVDTVERVEIIRDLRLGTFDVLVGINLLREGLDLPEVSLVAILDADKEGF
LRSEGSLIQTIGRAARNERGKAILYADHVTESMRRAIEETERRRAKQIAHNEEHGITPQT
IRKNIADIMADAHQVPGKKKSGRKAADKRGAYGAEAISPGEAARSIADLEKAMFKAAENL
EFEEAARLRDQIHQLRNQGLGVED
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggcattccgcccgcagccctgcccgataattatagtatgactcgacgatttcgcatg
gcctccagctacgaaccggccggtgatcagccgaccgcgatccaggccctggtcgattcc
ctgaacgcggggaactcccaccagaccctgctcggcgtgaccggttcgggcaagaccttc
accatggccaacgtgatcgagcgggtccagcgaccggcgctcgtcatggcaccgaacaag
accctggcggcccagctctacggagagttcaagtccttcttccccgacaatgccgtcgag
tacttcgtttcctactacgactactaccagcccgaggcctatgtgccttcgaccgatacc
ttcatcgagaaggatgcttcgatcaacgagcacatcgagcagatgcgcctgtcggccacc
aaggccctgctcgagcgtcccgatgcggtgatcgtggccacggtctcggccatctacggc
ctgggggaccccagttcctttctgaagatgaccttgccgctgaaggtcggggagcggatc
agccagcgcgagatcctgcgtcgcctggcggagatgcagtactcgcgcaacgacttcgag
ctccgtcgaggtacctatcgagtgcggggcgagctgatcgatctgtttccgggcgattcg
gagatggaagcggtccgggtcgagctcttcgatgacgagatcgagcggatcagccatttc
gatccgctgaccggtgagctgcacggcaaggtcgacgagctgacggtgtttccgaagacc
cactacgtcaccccgcgccaggtcgtgctggatgcgatcgaggcgatcaaggccgagctg
aaggagcgcctggcccagctcgaaggggccggcaagctgctcgaagcccagcgcatcaag
cagcgcacccagttcgatatcgagatgatgatggaactgggctattgccagggcatcgag
aactactctcgtcacctgaccgggcgccagccgggtgatccgccgccgaccctgttcgac
tacctgcccagcaacgccatcctgatcgccgacgagtcgcacgtcacgatcccgcagatc
ggcggcatgtaccggggcgatcgcgcgcgcaaggagacgctggtcgaatacgggttccgc
ctgccttcggcgctggacaaccggcccctcaagttcgaggagttcgaggcccgggcgccg
cagatgattctggtctcggccacaccacgcagctgggagctcgaacgctcgcccgtcgtg
gccgagcaggtggtcaggccgaccggtctgatcgaccccgaggtcgaggttcgtcccgtc
gacacgcaggtcgacgatctgctctccgagatccgcgaacgcgtcggcgatggcgatcgg
gtcctggtcacgaccctgaccaagcgcatggccgagaacctgaccgagtacctgtccgag
cacgacgtccgggtgcgctatctgcactccgacgtcgacaccgtcgagcgggtcgagatc
atccgcgatctgcgcctggggaccttcgacgtgctcgtcggcatcaacctgctgcgcgaa
ggcctggacctgcccgaggtgtccctggtggcgatcctggacgccgacaaggaaggcttc
ctgcgctcggagggctcactgatccagaccatcggtcgagcggcccgcaatgagcgcggc
aaggcgattctctatgccgaccacgtgaccgagtcgatgcgccgggcgatcgaggagacc
gagcgccgacgggccaagcagatcgcccacaacgaggaacacggcatcacgccgcagacg
atccgcaagaacatcgccgacatcatggccgatgcccatcaggtcccgggcaagaagaag
tcgggccggaaggcggcggacaagcggggtgcctacggcgccgaagcgatcagccccggt
gaagcggccaggagcatcgccgatttggagaaggcgatgttcaaggccgccgaaaacctc
gagttcgaggaggcggcccggctgcgcgaccagattcaccagctgcgcaaccagggcctg
ggggtggaggactga
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