Wenzhouxiangella marina: WM2015_237
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Entry
WM2015_237 CDS
T04011
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
wma
Wenzhouxiangella marina
Pathway
wma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WM2015_237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_237
Enzymes [BR:
wma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM2015_237
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WM2015_237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
AAA_19
Zn_ribbon_6
Zeta_toxin
AAA_22
HypA
zf-CHY
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AKS40626
UniProt:
A0A0K0XSM1
LinkDB
All DBs
Position
300180..302306
Genome browser
AA seq
708 aa
AA seq
DB search
MQVAVPVPLPQLFDYLPPAGEAPPAVGSRVLVPFGRRRLVGLVVSQDPASLEGALKPIED
VLDQGLLTPELVELARWCARYYLFPPGELVNLLLPTALRRSQPFRPAAPEAWRLTAAGLQ
ADLERAPRQAELREQLLGAPRSREQLLEQGFRPELIRRMHQSGLIEASEQQPELRPEPGP
ALNDEQREAVVRLLAARRRFAAFVLAGVTGSGKTEVYLRAARALMGRRGQVLVIVPEIGL
TPQLVRRFERRLGQRAWTYHSDLSEGERLACWQAARSGRARLIIGTRSAVFLPLKQAALI
VVDEEHDSSLKQQDGARYHGRDVAVLRAQREQVPIVLGSATPALESLNNIDQGRYRLLRL
RRRAGQAQEPRWRVLDQRGQTGPLSDALLGLIRKHLMAGGQVLLYRNRRGFAPVLMCKAC
GWSAECTRCSAHLTWHQVGERLQCHHCGAVQRPPRRCPECGDPGLVPLGAGTERLEALLN
EQFPDTPVHRVDRDRLTGKHDFETLLETVRDGRPCILVGTQMLAKGHHLPGVTLAAVLDV
DQGLFSADFRAPERLGQAIYQVAGRAGRADREGEFVLQTHHPEHLLLELLGRGDYLLFAR
QLLEERRAAALPPASGLALLRAESQQTEPARRFLRRAADILQGSGLNVSGPVPAIMTRRA
GFWRYQLWVQSAERARLANVMAGQLSQLQALPEARRVRWHADMDPLDF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtcgcggtccccgtcccgcttccgcagctgttcgactaccttcccccggccggc
gaagcgccgccggcggtgggttcacgggtgctggtgcccttcgggcgcaggcgcctggtc
ggcctggtcgtcagccaggaccccgccagtctcgaaggtgccctcaagccgatcgaagac
gtgctcgatcagggcttgctgacgcccgagctcgtggagctggctcgctggtgtgcgcgc
tactacctgtttccccccggcgagctggtcaatcttctgctgccgacggcgctgcggcgc
agccagccatttcgacccgcagcaccggaagcctggcgtctgacggcggccggccttcag
gcggatctggagcgggccccgcgtcaggccgaactgcgtgagcaactgctcggggcgccg
cgctcacgcgagcagctcctcgaacagggctttcggcccgaactgattcgccggatgcac
cagtccggcctgatcgaggccagcgagcagcagccggaactccgtcccgaaccggggccg
gcgctgaacgacgaacagcgtgaggcggtggtccgactgctggcggcaaggcgacgcttt
gccgccttcgtgctggccggcgtgaccggcagcggcaagaccgaggtctatctgcgcgcc
gcccgggccttgatggggcggcggggacaggtattggtgatcgtgccggagatcggcctg
acgccgcagctggtccgtcgcttcgagcgccgcctgggccagcgggcctggacctatcac
tccgatctgagcgaaggtgagcgcctggcctgctggcaggccgcgaggagcggtcgagcg
cgcttgatcatcggcacccgctcggccgtgttcctgcccctgaagcaggccgcgctgatc
gtggtcgacgaagaacacgacagctcgctcaagcagcaggacggcgctcgttaccatggc
cgcgatgtggccgttctgcgcgcgcagcgcgagcaggtgccgatcgtgctgggttcggcg
accccggccctggagagcctgaacaacatcgatcaggggcgctaccgcctccttcgacta
cgccgccgtgccggccaggcgcaggaaccccgatggcgcgtgctcgatcagcgcggacag
acgggccccctgagcgatgccctgctcggtctgattcgaaagcacctcatggccggtggc
caggtgctgctgtaccggaatcgacgtggcttcgcgccggtgctgatgtgcaaggcctgt
ggctggtcggccgaatgcactcgctgcagcgcacacctgacctggcatcaggtcggcgag
cgtctgcagtgccatcattgtggcgccgtgcagcgccctccacggcgctgtcccgaatgt
ggcgatcccggcctcgtgccgctgggcgccggtacggagcgcctcgaagccctgctgaat
gagcagtttccggacacgccggtgcatcgggtcgatcgggaccgcctgacgggaaagcat
gatttcgagaccctgctggagacggtccgcgatggccgaccctgcatactggtcgggacg
cagatgctggccaagggccaccacctgcctggcgtgaccctggccgccgtgctcgatgtg
gaccagggcctgttcagcgcagatttccgggcgcccgagcgcctggggcaggcgatctat
caggtggccgggcgagcggggcgagccgaccgggaaggggaattcgtcctccagacccac
caccccgaacacttgcttctcgagctgctcggtcgcggtgactatctgctgttcgcgcgc
cagcttctggaggagcgacgtgccgcggctctgccaccggccagcggcctggccctgctg
cgtgcggaatcgcagcagaccgagccggctcgacgcttcctccgtcgcgccgccgacatc
ctgcaggggtcggggttgaatgtctccggtccagtgcctgccatcatgacgcgcagggcg
ggcttctggcggtaccagctgtgggttcagtcagccgagcgggcccgcctggccaatgtc
atggccgggcaactgagccagctccaggcgctgcccgaggcacgccgcgtacgttggcac
gcggacatggacccgctcgatttctag
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