Wenzhouxiangella marina: WM2015_2419
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Entry
WM2015_2419 CDS
T04011
Name
(GenBank) TruD, tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
wma
Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wma03016
]
WM2015_2419
Enzymes [BR:
wma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
WM2015_2419
Transfer RNA biogenesis [BR:
wma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WM2015_2419
Prokaryotic type
WM2015_2419
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-ProteinID:
AKS42781
UniProt:
A0A0K0XYT1
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All DBs
Position
complement(2875763..2876797)
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AA seq
344 aa
AA seq
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MTTESEFDLDGRAWGPVPGRGRIRVSPEDFRVREDLGHCPDGEGEHLWLWVEKRERNTVD
VASDLARAAGVHPRQVSFAGLKDRNAVTEQYFSLHLPGSSDPDWRAWELEGVRIHRAERA
SRKIRRGRLKGNRFELRIRELDADRDALTERLERVRAGGVPNGFGQQRFGGNNLARARAL
FAGQLRRSPSKSKKGFYLSAARSLIFNQVLARRIAEGSWNRLLPGDVAMLDGTHSFFVAD
PDDTEQQRRCEAMDLHPTGPLVGLGEVPVTGEVLALETEVAEGEADLVEGLKRFRLEHQR
RALRMRVLDLEWGFTGPDTLELRFGLGQGSYATSVLREILDLID
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgacaactgagtccgagttcgacctcgacggccgcgcctggggtcccgtccccgggcgc
ggtcgcattcgcgtctcgccggaggacttccgggtccgtgaggacctcgggcattgcccc
gacggcgagggcgaacacctctggctctgggtcgagaagcgagagcgcaacaccgtcgat
gtcgccagcgatctggcgcgcgccgccggcgtccacccgcgccaggtcagctttgccggt
ctgaaggaccgcaacgccgtcaccgaacagtatttttccctccatctgcccggcagcagc
gacccggactggcgcgcctgggagctggagggtgtgcgcatccaccgggccgaacgcgcc
tcccgcaagatccggcgtggtcgactcaagggcaaccgcttcgagctgcgcatccgggag
ctcgacgccgatcgggacgcattgaccgagcgactggagcgggtccgtgcgggtggggtg
cccaacggcttcggccagcaacgcttcggcggcaacaacctggcccgggcacgcgcgctg
ttcgccggacagctgcgtcgatcgccatcgaaatcgaagaagggcttctatctgtccgcc
gcgcgcagtctgatcttcaatcaggtgctggcgcgacggatcgccgagggcagctggaat
cgcctcctccccggtgatgtggccatgctcgatggcacgcacagcttcttcgtcgccgat
cctgatgacactgaacagcagcgacgctgcgaggcgatggatctgcatccgaccggcccc
ctggtcgggctcggcgaggttcccgtcaccggcgaggtgctggccctggaaaccgaggtc
gccgagggcgaggccgatctcgtcgagggcctgaaacgcttccggctcgagcatcagcga
cgcgccctgcgcatgcgggtgctcgatctcgagtggggcttcactgggccggataccctc
gaactgcgcttcgggctggggcagggcagctacgccacctcggtcctgcgggagattctg
gacctgatcgactga
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