Wenzhouxiangella marina: WM2015_2520
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Entry
WM2015_2520 CDS
T04011
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
wma
Wenzhouxiangella marina
Pathway
wma03030
DNA replication
wma03430
Mismatch repair
wma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WM2015_2520
03430 Mismatch repair
WM2015_2520
03440 Homologous recombination
WM2015_2520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wma03032
]
WM2015_2520
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_2520
Enzymes [BR:
wma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WM2015_2520
DNA replication proteins [BR:
wma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WM2015_2520
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WM2015_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CC_Liprin_beta
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AKS42878
UniProt:
A0A0K0XYW4
LinkDB
All DBs
Position
2992960..2995092
Genome browser
AA seq
710 aa
AA seq
DB search
MLAVVMIGLGGLAWLFLAGLLLHAVLPAENWQALCEALDGRAGLLVLLWLMTLLPLSLGL
KAWLDRHLTDTERLLEQARALASSGHPIDEAQWSGSTQRALARLFNRLLEQRDASERDLN
ERVTTLSQRSEREKARLIALMADLDRSVVVCNLDGRILLYNPRARLQFRRLSTAPGVAGG
AELIGLGRSIHGLIERPLIEHALDKLKRRLARGANHPSSQFVTALAKGRLYRGLVSPVCD
LDEQGKRDPSRLSGFVLQLENISAQVEAQHARQQALEKFLAQTRDSLHKAQRLLSEATAP
GNAEARNGKPAKQLLERIEALDQQATLLQQQSTASSWPLEDIRAEDWLAAARDRLGEAVA
GPLHLKLPEQSIWLHMDSYAMTEALSGLVQHLAEHAPLTTLEIQLKPHNGQALLDLSLDW
PADRPLPELGDWLDQGPGQADPTQLGTIRQLLHRHTAECWLDRTAAERIAVRLLLPIVQG
QDELPAAAQGERPEFFDFELFRRREANTDLLDRALDQLDFTVFDLETTGLNPAAGDEIIQ
IGAIRVVNGRVLAQECFDQLIDPGRDIPALSIQIHGITPDQVRGQPRIDEVLPAFHRYCQ
DSVLVAHNAAFDMRCIRLKESALGLSFDQPVLDTLLLASLAQPNQASHSLDALAERFGLH
IEDRHSGLGDARATAELLVRLIPLLAEQGIVTLGQAQAASARSQFARIQY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgtcgtcatgatcggtctgggcggactggcctggctgttcctcgctggcctg
ctgctgcatgcggtgctcccggcggagaactggcaggcgctgtgcgaggccctggacggg
cgcgccggcctgctcgtgctgttgtggctgatgaccctgctgcccctgagcctggggctc
aaggcctggctggaccggcacctcacggacacggagcgcctgctcgaacaggcccgggcg
ctggcgagcagcggtcacccgatcgacgaagcacagtggagcggctcgacccagcgcgcg
ctggccaggctgttcaatcgactgctcgagcaacgggatgccagcgagcgcgatctcaat
gagcgcgtcaccaccctgagccagcgcagcgagcgcgagaaggcccggctgatcgccctg
atggccgacctcgaccgcagcgtcgtggtctgcaatctggacggccggatcctgctctac
aacccgcgcgcccggctccagttccgacgcctgtccaccgcacccggagtggccgggggc
gccgagctgatcggcctcgggcgctcgatccacggactgatcgaacggcccctgatcgag
cacgcgctcgacaagctcaagcgtcgcctcgcacgcggcgccaaccatccttcgagccag
ttcgtcaccgccctggccaagggccggctgtaccggggcctggtctctccggtctgcgac
ctcgatgagcagggcaagcgggatccctccaggctgagtgggttcgtgctgcagctcgag
aacatcagcgcccaggtcgaagcgcagcatgcccgccagcaggcgctggagaagttcctg
gcccaaacgcgcgacagtctgcacaaggcccagcggctgctgagcgaagcaacggcgccc
gggaacgccgaagcccgcaatggcaagcctgcaaagcagctactggagagaatcgaggcg
ctggaccaacaggccaccttgcttcagcaacagagcaccgcatcgagctggcccctggag
gacatccgggccgaagactggctcgctgccgcccgggaccgcctgggcgaagcggtggcc
ggccctctgcacctgaagctgcccgagcagtcgatctggctgcacatggacagctatgcc
atgaccgaagccctgtcgggcctggttcagcacctggccgaacatgcgccactgacgaca
ctcgagatccagctgaagccccacaatggtcaggccctgctggacctgtccctggactgg
ccggccgatcgcccactgcccgagctcggcgactggctggaccagggcccggggcaggcc
gatccgactcagctgggaaccatccggcaactgctgcaccgtcacacggccgagtgctgg
ctggaccggaccgccgccgaacggatcgccgtgcgcctgctgctgcccatcgtccagggg
caggacgagctccccgccgcggcccagggcgagcggccggaattcttcgatttcgagttg
ttcagacgacgcgaagcgaacaccgacctgctcgaccgagcgctggatcaactcgacttc
acggtcttcgacctggaaaccaccggactcaatccagccgccggggacgagatcatccag
atcggcgcgatccgggtggtcaatggccgtgtcctggcccaggagtgcttcgaccagctc
atcgatccgggtcgcgacatcccggccctgagcatccagatccatggcatcacgccggat
caggtccggggtcagccgcgcatcgatgaagtgctgccggccttccatcgctactgccag
gacagcgtcctggtcgcccacaatgcggccttcgacatgcgctgcatccgcctgaaggag
tcagccctgggcctgagcttcgatcagcccgtcctggacaccctgctgctggcctcactg
gctcagcccaatcaggcctcgcacagcctggatgcactggccgagcgcttcggactgcac
atcgaggaccggcacagcgggctcggcgacgcccgggcgacggctgaacttctggttcga
ttgatcccgctgctggccgaacagggcatcgtcaccctgggccaggcccaggcggcctct
gcccgcagccagttcgcccgtatccagtactga
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integrated database retrieval system
