KEGG   Wenzhouxiangella marina: WM2015_2925
Entry
WM2015_2925       CDS       T04011                                 
Name
(GenBank) ATP-dependent helicase HrpB
  KO
K03579  ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
Organism
wma  Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:wma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wma03019]
    WM2015_2925
Enzymes [BR:wma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     WM2015_2925
Messenger RNA biogenesis [BR:wma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     WM2015_2925
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Flavi_DEAD nSTAND3 Beta-lactamase2
Other DBs
NCBI-ProteinID: AKS43281
UniProt: A0A0K0Y089
LinkDB
Position
3508867..3510135
AA seq 422 aa
MSPPSASPSRLPIAEVLPELLQQLDRHATVLLQAPPGAGKTTQVPPALLGAGWRGDRKIL
MLEPRRLAARSAARFMARARDESIGDTVGYRVRLDTRVSERTRIEVVTEGILTRLIQADP
ELSGYAAVLFDEFHERSLQADLGLALVREAQQALRPDLRLLVMSATLDVEPLSALLDGAP
ILRSEGRSYPVRVEHRPGRERNPGWREQTALVARSIHQALAEEPGSLLVFLPGVGEIKAV
VEQLEGQLPDKVRLAPLFGDLSPAAQDAAIAPAPDGQRKVVLATSIAESSLTIEGIRVVI
DAGQQRRSTFDPNSGMSRLVTERVSKASADQRAGRAGRLEPGVCYRLWPESERLQPFSPP
EILEADLAPLVLELARWGARSPDAMTWLNPPRKHTGTRPASCCSCSMRWTRTARSPPMAK
PC
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagtccgccgtccgcatcgccgagccgcctgcccatcgcggaggtcctgccggaactg
ctccagcagctggatcggcacgccacggtgctgttgcaggccccgcccggcgccggcaag
accacgcaggtgcccccggccctgctgggggccggctggcgcggtgaccgaaagatcctg
atgctcgaaccccgtcgcctggcggcgcgatcggcagcgcgcttcatggcgcgtgcgcgg
gacgagtcgatcggcgacacggtgggctaccgggtgcggctggacacgcgggtctccgag
cgaacgcgaatcgaagtggtcacggaaggcatcctgacccgcttgattcaagccgacccg
gagctttccggctatgcggccgtgctgttcgacgaattccatgaacgctcgctgcaggcc
gatctcggcctggccctggtccgcgaagcccagcaggcactgaggccggatctgcgccta
ctggtcatgtccgcgaccctcgacgtcgagcccctctcggccctgctggacggggccccg
atcctgcgttcggagggccgctcctatccggtgcgggtcgaacaccgccccggtcgggag
cgaaatccgggctggcgggaacagacagccctggtcgctcgctcgatccatcaggcgctg
gccgaagagcccggctctctgctggtcttcctgcccggcgtgggcgagatcaaggccgtc
gtcgaacagctcgagggccaactgcccgacaaggtccgactggcgccattgttcggcgac
ctgtcgcccgccgcccaggacgccgcgatcgccccggcgcccgatggccagaggaaggtg
gtcctggcgacgtccatcgccgaatccagcctgaccatcgaaggcattcgggtggtgatc
gacgccggccagcagcgccgctcgaccttcgaccccaacagcggcatgagccgcctggtg
accgaacgcgtctcgaaggccagcgccgaccagcgtgccggtcgggctggccgcctggaa
ccgggcgtctgctaccgcctctggcccgagtcggagcgcctgcagcccttctccccgccc
gagattctcgaggcggacctcgcccccctggtgctggaactggcgcgctggggcgcccgc
tcccccgatgcgatgacctggctgaacccaccgcggaagcacactggaaccaggcccgcg
agctgctgcagctgctcgatgcggtggacgcggacggcgcgatcaccccccatggcgaag
ccatgctga

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