KEGG   Wenzhouxiangella marina: WM2015_615
Entry
WM2015_615        CDS       T04011                                 
Name
(GenBank) pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
wma  Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:wma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:wma03016]
    WM2015_615
Enzymes [BR:wma01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     WM2015_615
Transfer RNA biogenesis [BR:wma03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    WM2015_615
 Prokaryotic type
    WM2015_615
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AKS40997
UniProt: A0A0K0XTP9
LinkDB
Position
712196..713101
AA seq 301 aa
MTASRARKTDTPSGILLLDKPSGLGSNAALGRAKRLLGIKKAGHTGTLDPMASGLLALCF
GEATKVAGFLLDADKAYLAEATLGITTDSEDAEGEVLERRPVPELDEAAIEAVLDRFRGP
IEQVPPMHSALKHQGKRLYELARKGETVERPPRAVVIHALKLIGWQSPVLKLDVRCSKGT
YIRSLVRDIGEALGCGAHLSALRRTLSEPFSIDKAIGLADLDGLDVDQARSLLIPPDQAL
LHLPAVELEAALARRLQHGQTLAGIDGEAGLVRAYGEGEFLGIATLDESGHLRARRLFAT
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgactgcgtctcgcgctcggaagaccgacacgccgtccgggattctgcttctggacaag
ccttccgggctgggctccaacgccgccctgggtcgggccaagcgcctgcttggcatcaag
aaggccgggcatacgggcaccctcgatccgatggcatccggcctgctggccctgtgcttc
ggtgaggccaccaaggtggccggcttcctgctcgatgcggacaaggcctacctggccgaa
gcgacgctcggcatcaccaccgacagcgaagatgccgaaggtgaggtgctcgagcgccgg
ccggtgcccgagctcgacgaggccgccatcgaggccgtgctggaccgctttcggggcccg
atcgagcaggtgccgccgatgcactcggcgctcaagcaccagggcaagcgcctctacgaa
ctggcccgcaagggcgagaccgtcgagcgtccgccgcgcgcggtggtcattcatgccctg
aagctgatcggctggcagtcccccgtgctgaagctcgatgtgcgctgctccaagggcacc
tacatccgttccctggttcgtgacatcggtgaggccctgggctgtggagcgcatctgagc
gccctgcgccgaacgctgagtgaacccttctcgatcgacaaggcgatcggcctggccgat
ctggacggcctggacgtcgaccaggcgcgctcgctgctgatcccgcccgaccaggcgcta
ctgcatctgccggccgtcgagctcgaggcggcgttggccaggcgcctgcagcatggccag
accctggccggaatcgacggcgaggcgggcctggttcgtgcctatggagaaggcgagttc
ctgggcatcgcgaccctggatgagagcggccatctgcgagccaggcgtctgttcgccacg
gcttga

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