Wenzhouxiangella marina: WM2015_87
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Entry
WM2015_87 CDS
T04011
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
wma
Wenzhouxiangella marina
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_87
Enzymes [BR:
wma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
WM2015_87
DNA repair and recombination proteins [BR:
wma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
WM2015_87
Prokaryotic type
WM2015_87
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Ribosomal_S21
Motif
Other DBs
NCBI-ProteinID:
AKS40478
UniProt:
A0A0K0XS12
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All DBs
Position
111249..112490
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AA seq
413 aa
AA seq
DB search
MHPTRKAGLDRLKEFLPRAGRDYARERNHDHGPGRHDRVSALSPWIRYRLITEQEVLARV
LEQHSVTAAEKFVQEVCWRSYWKGWLQMRPSVWRDFLSERTRAVHRIEGNGGLARALEQA
EAGQTGIEGFDDWAKELIETGYLHNHARMWFASIWIFTLKLPWTLGADFFLRHLIDADPA
SNTLSWRWVAGLQTQGKTYLARPDNIEKFTAGRFRPAGLATEAPALDGPSPPPPGPLPPA
LRAEAPMDGPALLLLTPEDLHPESLLPGSAEIAGLLGARGVHSLSSWPWGEQARRFVSGA
LDDALGRASEHFGLSGRALETLDAAMLVDACRDAGVDRIVTADAPVGPVDDALDQLELQL
EKEGIQLERRRREWDALAWPQATKGFFPFKKKIPALLDAVGLGDRQGLLDLGA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccacccgcaaggccggcctggatcgactgaaggaatttctgccccgtgcggga
cgcgactatgcccgcgagcgcaaccacgatcacggacccggccggcacgaccgggtctcg
gcactttcgccctggatccgctaccgcctgatcaccgaacaggaggtgctcgcccgggtg
ctggagcaacactccgtgaccgccgcggaaaaattcgtccaggaggtctgctggcgcagc
tactggaagggctggctgcagatgcgcccttccgtgtggcgtgattttctttccgagcgg
actcgagcggtgcatcggatcgagggcaatggcggcctggccagggccctggaacaagcc
gaagccgggcagaccggcatcgagggtttcgatgattgggcaaaggagctgatcgagacc
ggctacctgcacaaccacgcccggatgtggttcgcctcgatctggattttcaccctgaag
ctgccctggaccctgggcgccgacttctttctgcggcatctgatcgacgccgatccggcg
tccaacaccctgagctggcgctgggtcgccggcctgcagacccagggaaagacctacctg
gcccgccccgacaacatcgagaagttcaccgccggccgctttcgtcccgccggccttgcg
accgaagccccggcactggacggccccagcccgccgccaccggggccactgccgccggcg
cttcgggccgaagccccgatggacgggccggcgcttctgttgctgacgcccgaagatctg
catccggaatccctgctgcccggatcggcggaaatcgccggtctgttgggtgcccgaggg
gttcacagcctgtcatcctggccctggggtgagcaggctcggcgtttcgtgagcggcgcc
ctggacgatgccctggggcgtgccagcgagcacttcggtctgagcggcagagcgctcgag
accctggatgccgccatgctcgtcgatgcctgccgagacgccggcgtcgaccggatcgtg
accgccgatgccccggtgggtccggtcgacgacgcattggatcagctcgagctgcagctg
gaaaaggaaggcatccagctcgaacgccgacgccgcgaatgggacgccctggcctggccg
caggcgaccaagggcttcttccccttcaagaagaagatcccggcgctgctggatgccgtg
ggtctgggtgatcgacaggggcttctcgatctgggtgcgtga
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