Candidatus Wolbachia massiliensis: ID128_00830
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Entry
ID128_00830 CDS
T10590
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wms Candidatus Wolbachia massiliensis
Pathway
wms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ID128_00830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wms03019
]
ID128_00830
03009 Ribosome biogenesis [BR:
wms03009
]
ID128_00830
Enzymes [BR:
wms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ID128_00830
Messenger RNA biogenesis [BR:
wms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ID128_00830
Ribosome biogenesis [BR:
wms03009
]
Prokaryotic type
rRNA processing factors
ID128_00830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QOD38449
UniProt:
A0A7M3U214
LinkDB
All DBs
Position
182728..184491
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AA seq
587 aa
AA seq
DB search
MANSGKRLLLIENSICSDEVRVALSVDNKVVEFEQEFKERRQLRGNIHVAHVKRIEPSLQ
AVFIEYGKNKQGFLSFSEISPDYFNIPEKEREIFFEGYSNDDCTEDGNNASANVSADYAT
SKNVNESGSGFVREVSLYKRYKLQDVISVNQKMLVQLTKEERGNKGASFTTYITLVGRYC
VFMPNSISKGGVSRRIEDVNVRKQLKDILNSIDLPKRSGLIIRTVGSGKSKKEIEQDYNY
LSSLWQNIQENASSVNVPSLIYNEADLIMRSIRDFCGNDIEVIVSGKEAFEAVKQYAKNA
LRSSKLRYRLYRGFVPIFTYYGIEDQISELYSNRVKLPSGGSLIITLTEAFVSIDVNSGK
MTGEDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIRQAFK
DDKARVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGIGKVKSNEVIVASILRDLQ
HVASRNRNRSFDLLAHGTVIAHIFNNKRSTVSTIEKEFNIKLNVSADDNLDVDTFVLKRG
DDVSSSDYKPLQNSGYKIEGSSGEKADNLQGSFWLTKWLSRLLSSNN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagtggtaaaagattactattaatagaaaattctatctgttctgatgaggta
agagttgccttgtcagttgataataaggttgtagaatttgaacaagaattcaaagaaaga
aggcaattgagaggtaatatacacgttgcccatgtgaagcgtatagaaccttctttgcaa
gctgtgtttattgagtatggaaaaaataagcaaggttttttatctttttccgagatatct
ccagattacttcaacattccagagaaggaaagggaaattttctttgagggctactcaaat
gatgattgcacagaagatggtaataatgcatcggcaaatgtttctgcagattacgcaact
agtaagaatgttaacgagtctggcagtgggtttgtaagagaagtatctttatataaaagg
tacaaattacaagatgttatttcagtcaaccaaaaaatgttggttcagttgaccaaagag
gaacgaggtaataagggtgcttcgtttacaacgtacataactttagtgggtaggtactgt
gttttcatgccaaattccataagtaagggtggagtgtcccgcagaattgaggatgttaac
gtcaggaagcaattaaaggatatattaaattcaatagatttaccaaaaaggtcaggttta
ataataagaaccgttggctcaggaaaaagtaaaaaagaaattgagcaggattacaactac
ttatcttcgttatggcagaatattcaagaaaatgcctcttctgtgaatgttccatcatta
atttataacgaagcagacctaattatgagatctattcgtgatttttgtgggaatgatata
gaagttatagtatctggaaaggaagcttttgaagcggtgaagcaatatgctaagaatgca
ttgagaagtagcaagttgcgttatagattatatagaggttttgttccgatttttacttac
tatggaatcgaagatcaaatttctgagttatatagcaatagggtaaaattaccatctggt
gggtctttaataataactttaactgaggcgtttgtttcgatagatgtaaactcaggaaaa
atgacaggagaagatagtatagaagaaacagcttatagaaccaatatggaagcagtacct
gagatatcaaggcaggtgaatttaagaggcttgtcagggttaatagtggtcgatttcatt
gatatgttgaaatatcagtattgtagggctgttgagtctgctattagacaggcatttaag
gacgataaggctagggttcagtttagttatataaatgactttggcttaatggtattttca
aggcaaagaataaagccaaacatacaagaaatcaacactacagagtgtttgcactgtaaa
ggaattgggaaggtaaaatcaaatgaagtgattgttgcatcgatattgagggacttacaa
cacgttgctagcagaaatcgaaatagatcatttgatttgttagcacatggtacggttata
gcacatatttttaataataaacgcagtacagtttctacaatcgaaaaagagtttaacatt
aaattaaatgttagtgctgatgacaatttagatgtagatacatttgttttaaaacgaggt
gatgacgttagttcaagcgattataagccattacagaactctggttataaaattgaaggc
agtagtggtgaaaaggctgataatttgcaaggcagtttttggttaactaaatggctttca
cgccttttgagctctaataactaa
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