Candidatus Wolbachia massiliensis: ID128_05775
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Entry
ID128_05775 CDS
T10590
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wms Candidatus Wolbachia massiliensis
Pathway
wms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ID128_05775 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wms03021
]
ID128_05775 (rho)
03019 Messenger RNA biogenesis [BR:
wms03019
]
ID128_05775 (rho)
Transcription machinery [BR:
wms03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ID128_05775 (rho)
Messenger RNA biogenesis [BR:
wms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ID128_05775 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA
AAA_22
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QOD38255
UniProt:
A0A7L7YQ88
LinkDB
All DBs
Position
complement(1195813..1197228)
Genome browser
AA seq
471 aa
AA seq
DB search
MTTINEDVLAKDKVTTEPKSVKKSEQISNNDMVKQTTNEDVKENGKALDLSELRGKTAEE
LLKLAEERKISTNGKGNGRMLKQEMIFSLMKKMSEEGGVTTGSGIVEILSDGFGFLRSAS
ANYAPSTDDVYISSGQIKKFNLRTGDMICGEIRPPGEKERYFTLTKVQSINSTEVSELRK
YVHFDNLLPLYPEGSLILENNSSGDSKKDINMRAVDIVAPLGKGQRALIVAPPRTGKTIL
LQQMAHSIATNHPEIELIVLLIDERPEEVTDMMRSVRGEVVSSTFDEPAYRHVQLAEIVI
EKAKRMVEHKKDVVILLDSITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNI
ENGGSLTIIATALVETGSKMDEVIFEEFKGTGNAEIILDRKLADKRIFPAIDITKSGTRK
EELLIDKAILNKIWVLRRILNPMGSVEAMEFLRDKLLLTKSNADFFNSMNN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaatgaagatgttttagcaaaagacaaggttacaactgaaccaaaatca
gtaaaaaaaagtgaacaaatttccaataatgatatggtaaaacaaacaacaaatgaagac
gtgaaggagaacggcaaagcactagatctgagtgaacttagggggaaaacagcagaagaa
ctgttaaaactagctgaagaaagaaaaatttcaactaatggtaaaggcaatggcagaatg
ctgaaacaggaaatgatattcagcttaatgaagaaaatgagcgaagaagggggtgttact
acaggaagcgggatagtggaaatattatctgatggtttcggcttcttgcgttcagcaagc
gcaaattatgctccgagtactgacgacgtttatatttccagtggacaaataaaaaaattt
aatctgcgtacaggggatatgatatgcggagaaataagaccgcctggtgaaaaagaaaga
tattttactttaactaaggtccaaagtataaattccactgaagtaagtgagttgagaaag
tacgttcattttgataatttacttcctctttaccctgaaggaagtttaattcttgaaaac
aacagcagcggagatagcaaaaaagacataaatatgcgcgctgtggatatagttgcacct
cttggaaaaggacaaagggcgttaatagttgcgccacctcgcacaggaaaaacaatattg
cttcagcagatggctcactctatagccacaaatcatcctgaaatagaactaatagtgtta
cttatagacgaaagacctgaggaagtgacagacatgatgcgctctgtacgtggtgaagta
gtgagctctacatttgatgaacctgcttaccgtcatgtacaacttgctgaaatagtaata
gaaaaagctaaaagaatggttgagcataaaaaggatgttgtaattttgctcgactctata
actcgtcttgcacgtgcttacaatgcagttattccttcatccggaaaagttttaactggt
ggtgtagattcaaatgcgctgcaaagaccaaaacgtttttttggagcggctcgtaatatt
gaaaatggcggttctttgacaataattgccactgctcttgtagaaactggttcaaaaatg
gatgaagttatctttgaagagtttaaaggtacaggtaatgctgagattatacttgataga
aaacttgccgataagcgaatatttccagctattgacattacgaaatctggaactagaaag
gaagaactattaattgataaggctatattaaataaaatatgggtattgcgtaggatactt
aatcctatgggatctgttgaagcaatggaatttttacgcgacaaactacttttaacaaag
agtaatgctgacttttttaactctatgaataattaa
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