Woronichinia naegeliana: KA717_10865
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Entry
KA717_10865 CDS
T08482
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
wna
Woronichinia naegeliana
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wna03016
]
KA717_10865
Enzymes [BR:
wna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KA717_10865
Transfer RNA biogenesis [BR:
wna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KA717_10865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UXE63113
UniProt:
A0A977L060
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All DBs
Position
2122076..2124076
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AA seq
666 aa
AA seq
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MEKGKLVEFRLQGERRLAVADRPDGKKDWIVVDQGGQSHKLRPQRVEYEVLGGPYQPTEI
KGFLQEVQNYLEPEHLEVAWEILVEDGATVTPQEMAQLLFSEQSPVFCYAAHCLLAEDKI
YFKNKGDSYEPRSISQVEEIKHQQSVELQRQQEKAGFLTRLQQAIAGESVEWIDSDRPRL
ESLERLVLQPELSHRQAEEVLQLLDRHHTPEAAFSLLVELGWWQRHENLFLRRSSYPRQF
SKKVLDLAYSVLHSPPPDPDPQRLDLTWLKVYTIDDESTEEIDDGLSVEFLSDGSHKLWI
HIADPSRFVFPNDELDLEARKRSTSLYLPTGMISMFPTELAIGPMSLVQGKFCPALSFGV
ILGETGEILDYSIHASLIKPTYRLTYEDVDEMLQMRIQAEPEIEILATAAKLRKDWRKSQ
GAINIKMPEAVIKVKSEDEIIIQLLEASFSRQLVAEMMILAGEVAGRYCQENNLPVPFRG
QPQPELPSEEELLSLPPGPVRACAVRRCMPRSEISITPYRHASLGLDTYTQVTSPIRRYT
DLLTHFQLKAHLRGEALPFAGDQVQQILYSVTLSSQEATSVERQTNRYWSLEYLRRNADQ
VWQGLMLRWLREDENLGLILLEELGLELPHRFERPVSPGDRLAVQVSRADPHRDEIRFRE
LLANES
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggaaaactggtcgaatttaggctgcaaggagaacgccgtttagcggtggca
gaccgcccagatggcaaaaaggattggattgtcgttgatcaagggggacagtcccacaag
ttacgtccccaacgggttgaatatgaagttttaggtgggccctatcaaccgacggagatt
aaaggttttcttcaggaagtacagaattatcttgagccagagcatttagaggtggcttgg
gagattttagttgaagacggggcaacggtaacgccgcaagaaatggctcaattgcttttt
tcggagcaaagtcctgtcttttgttatgcagcccactgtttattggctgaagataagatt
tattttaaaaataagggcgatagttacgaacctcgctccatttcccaggttgaagagatt
aagcatcaacaaagcgttgaactgcaacgtcaacaggaaaaagctggttttctgactcgt
ttgcaacaagcgatcgccggagagtcggtagaatggatagacagcgatcgtccccgtttg
gagtccctagagcgtttagtcttgcagcccgaactaagtcatcgtcaggccgaagaagtc
ttacaactgctagatcgtcatcacaccccagaagcggcctttagcttattggtagaatta
ggctggtggcagcgtcatgaaaatctctttttgcgtcgtagttcctacccccgtcagttt
tctaaaaaggtacttgacttggcttactctgtcctccattcaccaccacccgatcctgac
ccacaacgtctggatctgacctggctgaaggtctataccattgacgatgagagtactgag
gaaatagatgacggtctgagtgtagagtttttgagtgatggtagtcataagctctggatt
cacattgccgatcccagtcgctttgtttttcccaacgatgagttggatttagaagcccgt
aaacgcagtactagtctttatttacccacgggcatgatctctatgttcccaacggaattg
gcgatcggccccatgagcctcgttcagggtaaattctgtcccgctctcagttttggggtc
attttgggagaaacaggggaaattctggactacagtatccatgcgagtttgattaagccg
acctatcgtctgacctacgaagatgtggacgaaatgctccagatgcgaattcaggcggaa
ccagagattgaaatcctggcaacggcagcaaaattacgtaaggattggcgcaagtcccag
ggagccattaatatcaaaatgccagaggcggtcatcaaggttaagtctgaggatgaaatt
attattcaattattagaagcctctttttcgcggcagttagtagcagagatgatgattctg
gcgggggaagtggcaggacgttattgccaagagaataatttacccgttccctttcgcggt
caaccccaaccggaattaccttctgaagaggagttattatctttgccccctggcccggtg
cgagcttgtgcggtaaggcgttgtatgccccgtagcgaaattagtatcacgccctatcgt
catgccagtttaggattggatacctatacccaggtgacttctcccattcgtcgctatacg
gatctactgacccattttcaattaaaagcccatctacgaggtgaggcattgccctttgct
ggggatcaggtacaacaaattctttacagtgttacgctctcttcccaggaggcgacttcg
gtggagcggcaaaccaatcgctattggagcttggaatatttgcgtcgcaatgcggatcag
gtatggcaagggttaatgctgcgttggttgcgggaggatgaaaatctgggcttaatttta
ttggaagagttaggtctagaattacctcatcgttttgaacgtcctgtttcccccggcgat
cgcctagcggtgcaagtcagtcgggccgatccccatcgagatgaaattcgttttcgggaa
ttattagccaatgaaagctag
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