Woronichinia naegeliana: KA717_11930
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Entry
KA717_11930 CDS
T08482
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
wna
Woronichinia naegeliana
Pathway
wna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KA717_11930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wna03019
]
KA717_11930
03400 DNA repair and recombination proteins [BR:
wna03400
]
KA717_11930
Enzymes [BR:
wna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KA717_11930
Messenger RNA biogenesis [BR:
wna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KA717_11930
DNA repair and recombination proteins [BR:
wna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KA717_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UXE63286
UniProt:
A0A977L0G2
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All DBs
Position
2326627..2328096
Genome browser
AA seq
489 aa
AA seq
DB search
MTEISPTPSLRDLENLLQQIWGYSSFRFPQAEVIQSLLNAQDAVVVMPTGGGKSICFQLP
AVLQEGLTIVVSPLIALMENQVQELRDRRLSAACLHNELSRYHRRQVLQSLAQGQLSLLY
VAPETLLSPNLWTILCQPQIKIRGLMLDEAHCLVQWGDSFRPVYRRLGSFRQALLRQNPQ
AKPFGIAAFTATATPETQQDIATSLQLKKPRIFALSPYRSHLRLMVKIAWSNRCRRDLML
NFINLHPGQSGLIYVRSRRESELLSQALRLLKYETIAYHGGLGSQQRREIEQQWLRGELP
FVVCTNAFGLGINKPDIRWILHYHPPALLSEYLQEIGRGGRDQLPANCLTLISEPTGWLD
PSDRQRQGFFQQQLEQQYRQATAIARQIPRQGEIQAIKATFPDLELSLSLLHCLGQLEWL
DPFHYRLLNDRHSPHFSPINAIAVQSVQPYLRTRRCRWQFLLQAFGWLSEAKNLACGQCD
NCRRFKFKL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaatttctcccactcctagcctacgagatctcgaaaatttactccaacaaatt
tggggttattcgtcctttcgttttccccaggcagaagtgattcaatctcttttaaacgct
caggatgcggttgttgtgatgccaacgggcggcggaaagtcgatttgtttccaattaccc
gccgttcttcaagagggattaaccattgtcgtttctcctcttattgccctcatggaaaat
caagtgcaggaattacgcgatcgccgtttatcggccgcttgtttacacaatgaattatct
cgttatcaccgccgccaagtgctgcaatccttagcacagggtcaactaagcttattgtat
gtcgcgcctgaaaccctacttagtcctaacctttggacgattctctgtcagccccagatc
aagattcggggtttgatgttggacgaagcccattgcctagtacagtggggagatagcttt
cggccagtttatcgtcgtttggggagttttcgtcaggctctcctccggcaaaatccccag
gcgaaaccctttggcattgccgcttttacggctacggcaacccccgaaacgcaacaggat
atcgccactagtttacagttaaaaaaacctcgtatttttgccctcagtccctaccgttcc
catttacgattgatggtaaaaattgcctggagtaatcgttgtcggcgagatttgatgctc
aattttattaatcttcatcctggccagagtggcttaatttatgtgcgatcgcggcgggaa
agtgaacttttgagccaagcattacgcttattaaaatatgaaacaattgcctatcatggt
ggcttaggatctcaacaaagacgggaaattgaacaacaatggttaaggggagaattgccc
tttgtggtttgtacaaatgcctttgggctagggattaataaacccgatattcgttggatt
ttgcactatcatcctcccgctttattatcggaatatcttcaggaaattggtcgaggggga
cgggatcaattaccggcaaattgtttgaccctgattagtgaaccaacgggctggcttgat
cccagcgatcgccaacgtcaaggcttttttcaacagcaattagagcaacaataccgtcaa
gccactgcgatcgctcgtcaaattcctcgccaaggagaaatccaagcaattaaggccacc
tttcccgatctagaattatccctttctctgcttcactgtctaggacaactggaatggtta
gatccctttcattatcgtttgctcaatgaccgtcactcacctcatttttcccctatcaat
gccatagcagtccaatctgttcaaccttacctaagaactcgccgatgtcgttggcaattt
ttgcttcaggcctttggttggttatcggaggcaaaaaatttggcctgtggtcaatgtgat
aattgtcgtcgctttaagttcaaactttaa
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