Woronichinia naegeliana: KA717_14065
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Entry
KA717_14065 CDS
T08482
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wna
Woronichinia naegeliana
Pathway
wna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KA717_14065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wna03019
]
KA717_14065
03009 Ribosome biogenesis [BR:
wna03009
]
KA717_14065
Enzymes [BR:
wna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KA717_14065
Messenger RNA biogenesis [BR:
wna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KA717_14065
Ribosome biogenesis [BR:
wna03009
]
Prokaryotic type
rRNA helicases
KA717_14065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
AAA_30
HEM4
Cas3-like_C_2
SNF2-rel_dom
AAA_19
CMS1
Flavi_DEAD
Fe-ADH
Tla3_C
Motif
Other DBs
NCBI-ProteinID:
UXE63629
UniProt:
A0A977L131
LinkDB
All DBs
Position
complement(2732655..2734118)
Genome browser
AA seq
487 aa
AA seq
DB search
MTISFQSLGLSEERSIHLESLGFTEPTAIQAEAIPLLLNGQDMVAQSQTGTGKTAAYALP
ILEKIERRPGVQALILTPTRELAQQVAEAIKEFANERRLYVLTVYGGQAIDRQIRSLERG
VQIVVGTPGRVIDLLDRRKLNLETVNWVVLDEADEMLSMGFIDDVKTILKKTPAETRQTA
CFSATMPREIRDLVNQFLKDPVTVSVKQQQSTPSKIDQQVYMVPRGWSKMKALQPILEME
NPESAIIFVRTKQTAAELTSKLQEAGHTVDEYHGNLSQSQRERLVQRFRDNKIKLVVATD
IAARGLDVENLSHVINFDLPDNAETYIHRIGRTGRAGKTGTAIALVEPIDRRLLRQIEQR
LKQRIETSQIPDRSQVEAKRLEKLQNQIQEALTGERMASFLPLVRDLSADYDPQAIAAAA
LQMIYDQNCPNWMKTDWEVPDVGTQKPLIKRKFNKPEGGKTFSNKPTGKPTNYNRYASDR
KPVFSDQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcctttcaaagcttaggtttatctgaagagcgttctattcacttagaaagt
ctgggttttacagagccaaccgccattcaagccgaagcgattcctttattgcttaacggt
caagatatggttgcccaatcccaaactggtacgggaaaaacggcggcctatgccttaccc
attctcgaaaagattgaacgtcgtcctggtgttcaggctttaattctgactccgacccgt
gagttagcccaacaggtggcggaagcgatcaaagaatttgccaatgagcgtcgcctctat
gtgctgacggtttacggtggtcaagcgattgatcgccaaattcgcagtttagagcggggt
gtacagattgtggtcggaacaccgggacgagtcattgatctgttagaccgccgtaaatta
aatctagaaaccgtcaattgggtggtgctagatgaagctgatgaaatgctcagtatgggt
tttattgatgatgtcaaaaccattctcaaaaagactccggctgaaacccgacaaactgct
tgtttttctgccaccatgccccgcgaaattcgggatttggtcaatcagtttctcaaagat
ccggtaacggtttcagtcaaacaacaacagagcacaccctccaaaattgaccaacaggtt
tatatggttcctcgcggttggtcgaagatgaaagcccttcagcctatcctcgaaatggaa
aatcctgaatcggccattatttttgtccgtactaagcaaactgccgccgagttaaccagc
aagctacaagaagccggtcacacggtggatgagtatcacggtaatttgagtcaatcccaa
cgggaacgcttagttcaacgttttcgggacaataagatcaaattggtggtggcaacggat
attgctgcacgggggctagatgtggaaaatctcagccatgtcattaactttgacttgccg
gataatgctgaaacctatattcaccgtattggtcgtactggccgggcgggtaaaactgga
acggcgatcgccttagtggaacccattgatcgtcgtctattacgtcaaattgaacaacgg
ttaaaacaacgcattgaaacctctcaaattcccgatcgctcccaggtagaagccaaacgt
ctggagaaattacaaaatcaaatccaagaagctctaacgggtgaacggatggcctctttc
ttacccttggtacgggatttgagtgcagactatgatccccaagcgatcgccgcggcggct
ctccagatgatctacgatcaaaattgtcctaactggatgaaaacagattgggaagttcct
gatgtgggaacccagaaacccctcattaaacgcaaatttaataagccggaagggggtaag
acctttagcaataagcctactggtaaaccaactaactataaccgctatgcttctgatcgc
aaacctgtttttagtgatcagtaa
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