Woronichinia naegeliana: KA717_15555
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Entry
KA717_15555 CDS
T08482
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
wna
Woronichinia naegeliana
Pathway
wna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KA717_15555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wna03019
]
KA717_15555 (recQ)
03400 DNA repair and recombination proteins [BR:
wna03400
]
KA717_15555 (recQ)
Enzymes [BR:
wna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KA717_15555 (recQ)
Messenger RNA biogenesis [BR:
wna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KA717_15555 (recQ)
DNA repair and recombination proteins [BR:
wna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KA717_15555 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
RE_AccI
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
UXE63839
LinkDB
All DBs
Position
complement(3049016..3051466)
Genome browser
AA seq
816 aa
AA seq
DB search
MSSAVVTEVNPPSLEQSLKHFFGYESFRTGQRQIIEQALQCQDQLIIMPTGGGKSLCFQL
PALLMPGLMIVVSPLIALMQDQVDALLDNGISATFLNSTLTSDVTRQREMAMMRGEIKLL
YVAPERLLLEHFLEFLETINLKIGISTFAVDEAHCVSEWGHDFRPEYRQLNKLRDRFPKI
PMMALTATATQRVREDIIEQLKLQQPAIHIASFNRPNLYYEVYRENGQRFTQMLKIIRDS
KGSGIIYCLSRKTVENVAEKLQRCGINALPYHAGLEDKQRSENQTRFIRDDVQVIVATIA
FGMGINKPDVRFVIHYNLPKTLESYYQESGRAGRDGEAANCSLFLNYGDIKSLEYFIEQK
PDPNEQRVARQQIRQVVEYAEATECRRTVQLSYFGEFFAGDCGQCDNCLSQNPMENWTIE
AMKFLSCVARCQQKYGMNYIIEVLRGTKNHKILERGHDQLSTYGIGKDRSVDEWKNLGRS
LLRQGLLDQSEDGYSILRLNERSWEVMKKQRQVEIRVAKTPQKELKSVNLAAEIERRYEQ
LRRCRKLLADQQSIPPYMIFSDSTLRLMSQQNPQTIEELKRVSGVGDYKLQRYGQAFLNT
LALEAKRNEEDGEARKDGEAREELSKKGNTIETRSLVHYPPEKSNGKLGKVRDFQKQEII
SSDLTTLNAKRIDLLGKDSENLATNPLPKQELNGSLVLTKTLNKDNFDNFFDPDLSDSLT
RTLVLYKKGLDLAAIALARSLKPTTIAEHFVKLIEANHVTNLDSLISPAHQRAILQAIDV
VGDERLMPIYEQLKGKYAYEEIKLVRSYWRQNAMEF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgccgttgtaaccgaggttaatcctccctccctagaacaatctcttaaacac
ttttttggctatgaatcttttcgtactggacaacggcaaattattgagcaagcccttcaa
tgtcaagatcaattaattatcatgcctacggggggcggaaaatctctttgttttcaactt
ccggctttgctaatgcctggtttaatgattgtggtttctcctttaattgccttgatgcaa
gatcaagttgatgcgctactagacaatggcattagtgccacttttttaaatagtactctt
acctctgatgtcactcgtcagcgagagatggcaatgatgagaggggaaattaaattacta
tatgttgccccagagcggcttttattagaacattttttagaatttttagaaactattaat
ttaaaaataggcatttcgacttttgcagtggatgaagctcattgtgtttccgagtggggc
catgattttcgccctgaatatcgacagttaaataaactccgcgatcgctttcctaaaatt
ccgatgatggccctaacggcaacggcaacccagcgcgtcagagaagatattattgagcag
ttaaaattacagcaaccggcgattcatattgccagctttaatcgtcctaatttatattac
gaagtttatcgagaaaatggtcaaagatttacccaaatgctaaaaatcattagagatagt
aaagggtctggtattatctattgtctcagtcgcaaaacggtggagaatgttgccgaaaaa
ctacagcgatgcggtatcaatgctttgccttatcatgctggtttagaagataaacaaaga
agtgaaaaccaaacccgttttattcgggatgatgtgcaggttattgtggcaactatcgcc
tttggtatgggcattaacaaacctgatgtgcgctttgttattcattacaatttacccaaa
accttagaaagttattatcaagaatctggtcgagccggtcgggatggtgaagcagccaat
tgcagtttatttttaaattatggcgatatcaaaagtttagaatattttattgagcaaaag
cctgatcccaatgagcaaagggtggcccgtcaacagattagacaggtggtggaatacgca
gaagcaacggaatgtcgtcgcacggttcaactcagttattttggcgaattttttgcggga
gattgtggtcaatgtgataattgcctctctcaaaatccgatggaaaattggacaatagaa
gcaatgaaatttttgtcttgcgtcgctcgttgtcagcagaaatatgggatgaattatatt
attgaagtgttgcgaggaacgaaaaatcataaaatcttagaaaggggtcatgatcagctt
tctacctatggcattggtaaggatcgcagtgtggatgagtggaaaaatttagggcgatcg
ctactacgacaagggttattagatcagagtgaggatggctattctattttaagattaaat
gaacgcagttgggaggtcatgaaaaaacagcgtcaggttgagattagagtggctaaaact
ccacaaaaagaattaaaaagtgttaatttggctgctgaaattgaaaggcgttatgagcaa
ttacgtcgctgccgcaaactgttagccgatcagcaatcgattccaccctacatgattttt
agtgattctaccttgcgtttaatgtcgcaacaaaatcctcaaacaatcgaggaattaaag
cgggtttctggggtgggagattataaattacaacgctacggtcaagcttttttaaatact
ctagctttggaagcaaagagaaatgaggaagatggggaagcgaggaaagatggggaagca
agggaggaattgtctaaaaaaggaaataccattgaaactagaagtttagtccattatcca
ccagaaaagagcaatggcaagttgggaaaagtaagagattttcaaaagcaagagatcatt
tcatcggatttaaccactttaaatgctaaaagaattgatttgttaggtaaagactctgaa
aatttagcaactaatccattgccgaaacaagagcttaatggctccttagtgttaacaaaa
accttaaataaagataattttgataacttttttgatcccgatctcagtgatagtttaacc
agaactttagtgttgtataaaaaggggttagatctggccgcgatcgccctagcccgttct
ctgaagcctactaccattgccgagcattttgtgaaactgattgaagctaatcatgtgact
aatttagattctttaatttctcctgcccatcaacgagcaattttacaggcgatcgatgtg
gttggtgatgaacggttaatgcctatttacgaacaactgaaaggaaaatatgcctacgaa
gaaattaaattagtgcgttcctattggcgacaaaatgcgatggaattttaa
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integrated database retrieval system
