Woronichinia naegeliana: KA717_19190
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Entry
KA717_19190 CDS
T08482
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
wna
Woronichinia naegeliana
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wna03400
]
KA717_19190 (sbcC)
DNA repair and recombination proteins [BR:
wna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KA717_19190 (sbcC)
Archaeal homologous recombinant proteins
KA717_19190 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Rad50_zn_hook
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UXE64411
UniProt:
A0A977L2J0
LinkDB
All DBs
Position
complement(3806080..3809103)
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPQQLTLKNFLSYQDTTLDFRGLHTACICGANGAGKSSLLEAITWVLWGKSRADSEDDV
LHNGSDYVRVDFLFENNQETYKIIRSRHRGKSSALDFLIKYEAGFRSLSGKGLRATQEQI
IEVLKLDYDTFINSAYLRQGRADEFMLKGPSDRKQILANLLKLDQYEVLAIKAKDISKQK
QGQIELLEATLQAVEQDLAQREVVEQHRKRLEQEIEIIQKIQEQEQWQLQQLQTSQNQRR
TWQKQLDWQQSQAQNLMLEIQRLDQADQELKQQLQKLQAILDQREEIQQNYQEFLQYRQQ
ESDLASKFQLFQEAQQQQQQLEQEILQTDHAIQLELKQFQMRLDTLNQQEKELQPILTKT
LDIETGLSQLRKARQRLAHFDSLQHRVSPLQQRRYELQSDVERAAAQLQAKREQRQLLRQ
ELQANITEIPRKRQALQTTDAQIKELDKKKVYQKRVHEKGQERRHFQERLQEHQRLCEEQ
IQELIQKQQLLDTPGAICPLCEQNLDGHYHQQVIQKTQEQQQQLQEQIWVLKEQMSVCER
ELQILRGEYAQIKEELAIYDTLQQQYGQLEADLERSGEIYNQIASLDTEIEQLDLILAQK
TYAQDLQQELINLNEELEQLQYDEQSHALVRGEVEKYRWAEIQQSKLEDAQRRLKLIQAE
RPQLLAKIADRQLASQQLHHDSELYQQLQAAQKALNHLGYQRSQHQELLQTLQKKQVWQL
RYQELQQAQEQFPPYQARLDENSDRREQRQREYQTMHLEIQRLNHQVEHYADHEAQIKTL
EASIQSRRRQLDDYLAQKGRYEQQAIQLDILQEQNQEHRQQLQEIKKQYRIHQELAKAFG
KNGIQTLMIENILPQLEAETNRILARLTGNQLHIQFVTQKASKATAQRRTPKFIDTLDIL
IADIQGTRPYETYSGGEAFRINFSIRLALAKLLAQRAGTALQLLIIDEGFGTQDAEGCER
LVAAINAIAADFACILTVTHIPQFKEAFQQRIEVQKSDQGSKVRILS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
gtgattccccaacaattaacccttaaaaattttctcagctaccaggatacaaccctcgac
tttcggggattgcatacggcttgcatttgtggtgcgaatggggcaggtaaatcttctcta
ttggaggccattacctgggtgctttggggaaaaagtcgggcggatagcgaagatgatgtg
ctgcacaatggcagcgactatgtacgagttgatttcttgtttgaaaataatcaagaaact
tacaaaattattcgcagtcgtcatcgaggcaaaagcagtgccttagattttttaattaaa
tatgaagcggggtttcgttctctgtcaggtaaaggtttgcgggctactcaagagcaaatt
attgaagttcttaaattagattacgatacttttattaattctgcctatttacgtcaggga
cgggcggatgaatttatgctcaaaggccccagcgatcgcaaacaaattttagctaattta
ttaaaattagatcaatacgaagttttagcaattaaagcgaaagatatttccaagcaaaag
caaggacagatcgagttactagaggcgacattacaagccgttgaacaggatttagcccag
agagaagtggttgaacagcatcgaaaacggttggagcaggaaattgaaatcattcaaaag
atacaggaacaggaacaatggcaacttcagcaattacaaaccagccaaaatcaacgtcga
acctggcagaaacaattggattggcaacaaagtcaagcccaaaatttaatgctagaaatc
caacgtcttgatcaagctgatcaggaacttaagcaacaattacaaaaacttcaagcaatt
ttagatcaaagggaagaaatccagcaaaactatcaagaatttttacaatatcgacaacag
gaatcagatctagcaagcaaatttcagctttttcaggaagcccaacagcaacagcaacaa
ctagagcaagaaattctgcaaaccgatcatgccattcaactggaattaaagcaatttcag
atgcgtcttgatactcttaatcaacaggaaaaagaattacagcccattctgacaaaaacc
ctagatattgaaaccggtctcagtcaattaagaaaggctcggcaacgattagcacatttc
gatagtctccaacatcgcgtttcgccgctacaacaaagacgctatgaacttcagtccgac
gttgaacgagcagccgctcaattacaagcaaaacgggaacaacgtcaacttttgaggcaa
gaattacaggccaatattactgaaattccccgtaaacgtcaggccttacaaacgacagat
gctcagattaaagaactcgataaaaagaaagtttaccaaaagcgagttcatgaaaaaggt
caggagcgtcgccattttcaagagcgccttcaggaacatcaacgactctgtgaagaacag
attcaggaattaattcaaaaacaacaattactcgatacaccgggtgcaatttgtcctctc
tgtgagcaaaatttagatggtcattatcatcaacaggtcattcaaaaaacccaggaacaa
cagcaacagttacaggagcaaatttgggttttgaaagaacaaatgtctgtctgtgaaaga
gaattacaaattttacggggtgaatatgcccaaatcaaagaagagttagccatttatgat
actttgcaacaacagtatggacaattagaagctgatttagagcgtagtggcgagatttat
aatcaaattgctagtcttgacacggaaattgaacagttagatttaatactagctcagaaa
acctatgcccaggatttacaacaggaattaattaacttgaatgaggaattagagcaatta
cagtatgatgaacaaagtcatgctttagtcaggggagaagtagaaaaatatcgctgggct
gaaattcaacaatcgaaactagaagatgctcaacgtcgtctcaaattgattcaggcagaa
cgtcctcaactattagcaaaaattgcagatcgtcaacttgctagtcaacaattacatcac
gattctgagctttatcaacaattacaagcggctcaaaaggcactcaatcatttaggttat
cagcgatcgcagcaccaggaattattacaaaccctacagaaaaaacaggtttggcaatta
cgctatcaagaattacaacaggctcaggaacaatttcccccctatcaagcgcgtttagat
gaaaatagcgatcgccgagaacaacggcaaagggaatatcaaaccatgcaccttgaaatc
caacgcttaaaccatcaagtagaacattatgccgaccatgaagcccaaattaaaacccta
gaagccagtatccaaagtcgtcgtcgtcaattagatgactatttagctcaaaaaggacgt
tatgaacaacaggcaattcaattagatattttgcaggaacaaaatcaggaacatcgacaa
caactgcaagaaattaaaaaacaatatcgcattcatcaggagttggctaaagccttcgga
aaaaatggcattcaaaccctcatgattgaaaacattctgccccaattagaagcagaaacc
aatcgtatcctcgctcgtttaacgggtaatcaactccatatccaatttgtcactcaaaaa
gccagtaaagccactgcccaacgtcgtactcctaaatttattgacaccttagatattctg
attgctgatatccaaggaactcgtccctacgaaacctattcaggcggtgaagcttttcgg
attaatttttctatccgtttggccttagcaaaactgcttgcccaaagagccggtacagca
ctacaattactgattattgatgagggatttggaacgcaagatgccgaggggtgtgaacgt
ttggtcgctgctattaacgcgatcgccgccgattttgcctgtattttaactgtcacccat
attccccaatttaaagaagcgtttcaacagcgtatcgaagtgcaaaaatcggatcaagga
tcaaaagtacgaattttgagttga
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