KEGG   Woronichinia naegeliana: KA717_19190
Entry
KA717_19190       CDS       T08482                                 
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
wna  Woronichinia naegeliana
Brite
KEGG Orthology (KO) [BR:wna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wna03400]
    KA717_19190 (sbcC)
DNA repair and recombination proteins [BR:wna03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KA717_19190 (sbcC)
    Archaeal homologous recombinant proteins
     KA717_19190 (sbcC)
SSDB
Motif
Pfam: AAA_23 AAA_15 SMC_N SbcC_Walker_B AAA_29 AAA_21 ABC_tran Rad50_zn_hook RsgA_GTPase
Other DBs
NCBI-ProteinID: UXE64411
UniProt: A0A977L2J0
LinkDB
Position
complement(3806080..3809103)
AA seq 1007 aa
MIPQQLTLKNFLSYQDTTLDFRGLHTACICGANGAGKSSLLEAITWVLWGKSRADSEDDV
LHNGSDYVRVDFLFENNQETYKIIRSRHRGKSSALDFLIKYEAGFRSLSGKGLRATQEQI
IEVLKLDYDTFINSAYLRQGRADEFMLKGPSDRKQILANLLKLDQYEVLAIKAKDISKQK
QGQIELLEATLQAVEQDLAQREVVEQHRKRLEQEIEIIQKIQEQEQWQLQQLQTSQNQRR
TWQKQLDWQQSQAQNLMLEIQRLDQADQELKQQLQKLQAILDQREEIQQNYQEFLQYRQQ
ESDLASKFQLFQEAQQQQQQLEQEILQTDHAIQLELKQFQMRLDTLNQQEKELQPILTKT
LDIETGLSQLRKARQRLAHFDSLQHRVSPLQQRRYELQSDVERAAAQLQAKREQRQLLRQ
ELQANITEIPRKRQALQTTDAQIKELDKKKVYQKRVHEKGQERRHFQERLQEHQRLCEEQ
IQELIQKQQLLDTPGAICPLCEQNLDGHYHQQVIQKTQEQQQQLQEQIWVLKEQMSVCER
ELQILRGEYAQIKEELAIYDTLQQQYGQLEADLERSGEIYNQIASLDTEIEQLDLILAQK
TYAQDLQQELINLNEELEQLQYDEQSHALVRGEVEKYRWAEIQQSKLEDAQRRLKLIQAE
RPQLLAKIADRQLASQQLHHDSELYQQLQAAQKALNHLGYQRSQHQELLQTLQKKQVWQL
RYQELQQAQEQFPPYQARLDENSDRREQRQREYQTMHLEIQRLNHQVEHYADHEAQIKTL
EASIQSRRRQLDDYLAQKGRYEQQAIQLDILQEQNQEHRQQLQEIKKQYRIHQELAKAFG
KNGIQTLMIENILPQLEAETNRILARLTGNQLHIQFVTQKASKATAQRRTPKFIDTLDIL
IADIQGTRPYETYSGGEAFRINFSIRLALAKLLAQRAGTALQLLIIDEGFGTQDAEGCER
LVAAINAIAADFACILTVTHIPQFKEAFQQRIEVQKSDQGSKVRILS
NT seq 3024 nt   +upstreamnt  +downstreamnt
gtgattccccaacaattaacccttaaaaattttctcagctaccaggatacaaccctcgac
tttcggggattgcatacggcttgcatttgtggtgcgaatggggcaggtaaatcttctcta
ttggaggccattacctgggtgctttggggaaaaagtcgggcggatagcgaagatgatgtg
ctgcacaatggcagcgactatgtacgagttgatttcttgtttgaaaataatcaagaaact
tacaaaattattcgcagtcgtcatcgaggcaaaagcagtgccttagattttttaattaaa
tatgaagcggggtttcgttctctgtcaggtaaaggtttgcgggctactcaagagcaaatt
attgaagttcttaaattagattacgatacttttattaattctgcctatttacgtcaggga
cgggcggatgaatttatgctcaaaggccccagcgatcgcaaacaaattttagctaattta
ttaaaattagatcaatacgaagttttagcaattaaagcgaaagatatttccaagcaaaag
caaggacagatcgagttactagaggcgacattacaagccgttgaacaggatttagcccag
agagaagtggttgaacagcatcgaaaacggttggagcaggaaattgaaatcattcaaaag
atacaggaacaggaacaatggcaacttcagcaattacaaaccagccaaaatcaacgtcga
acctggcagaaacaattggattggcaacaaagtcaagcccaaaatttaatgctagaaatc
caacgtcttgatcaagctgatcaggaacttaagcaacaattacaaaaacttcaagcaatt
ttagatcaaagggaagaaatccagcaaaactatcaagaatttttacaatatcgacaacag
gaatcagatctagcaagcaaatttcagctttttcaggaagcccaacagcaacagcaacaa
ctagagcaagaaattctgcaaaccgatcatgccattcaactggaattaaagcaatttcag
atgcgtcttgatactcttaatcaacaggaaaaagaattacagcccattctgacaaaaacc
ctagatattgaaaccggtctcagtcaattaagaaaggctcggcaacgattagcacatttc
gatagtctccaacatcgcgtttcgccgctacaacaaagacgctatgaacttcagtccgac
gttgaacgagcagccgctcaattacaagcaaaacgggaacaacgtcaacttttgaggcaa
gaattacaggccaatattactgaaattccccgtaaacgtcaggccttacaaacgacagat
gctcagattaaagaactcgataaaaagaaagtttaccaaaagcgagttcatgaaaaaggt
caggagcgtcgccattttcaagagcgccttcaggaacatcaacgactctgtgaagaacag
attcaggaattaattcaaaaacaacaattactcgatacaccgggtgcaatttgtcctctc
tgtgagcaaaatttagatggtcattatcatcaacaggtcattcaaaaaacccaggaacaa
cagcaacagttacaggagcaaatttgggttttgaaagaacaaatgtctgtctgtgaaaga
gaattacaaattttacggggtgaatatgcccaaatcaaagaagagttagccatttatgat
actttgcaacaacagtatggacaattagaagctgatttagagcgtagtggcgagatttat
aatcaaattgctagtcttgacacggaaattgaacagttagatttaatactagctcagaaa
acctatgcccaggatttacaacaggaattaattaacttgaatgaggaattagagcaatta
cagtatgatgaacaaagtcatgctttagtcaggggagaagtagaaaaatatcgctgggct
gaaattcaacaatcgaaactagaagatgctcaacgtcgtctcaaattgattcaggcagaa
cgtcctcaactattagcaaaaattgcagatcgtcaacttgctagtcaacaattacatcac
gattctgagctttatcaacaattacaagcggctcaaaaggcactcaatcatttaggttat
cagcgatcgcagcaccaggaattattacaaaccctacagaaaaaacaggtttggcaatta
cgctatcaagaattacaacaggctcaggaacaatttcccccctatcaagcgcgtttagat
gaaaatagcgatcgccgagaacaacggcaaagggaatatcaaaccatgcaccttgaaatc
caacgcttaaaccatcaagtagaacattatgccgaccatgaagcccaaattaaaacccta
gaagccagtatccaaagtcgtcgtcgtcaattagatgactatttagctcaaaaaggacgt
tatgaacaacaggcaattcaattagatattttgcaggaacaaaatcaggaacatcgacaa
caactgcaagaaattaaaaaacaatatcgcattcatcaggagttggctaaagccttcgga
aaaaatggcattcaaaccctcatgattgaaaacattctgccccaattagaagcagaaacc
aatcgtatcctcgctcgtttaacgggtaatcaactccatatccaatttgtcactcaaaaa
gccagtaaagccactgcccaacgtcgtactcctaaatttattgacaccttagatattctg
attgctgatatccaaggaactcgtccctacgaaacctattcaggcggtgaagcttttcgg
attaatttttctatccgtttggccttagcaaaactgcttgcccaaagagccggtacagca
ctacaattactgattattgatgagggatttggaacgcaagatgccgaggggtgtgaacgt
ttggtcgctgctattaacgcgatcgccgccgattttgcctgtattttaactgtcacccat
attccccaatttaaagaagcgtttcaacagcgtatcgaagtgcaaaaatcggatcaagga
tcaaaagtacgaattttgagttga

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