Woronichinia naegeliana: KA717_20225
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Entry
KA717_20225 CDS
T08482
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
wna
Woronichinia naegeliana
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KA717_20225 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wna03021
]
KA717_20225 (rpoD)
Transcription machinery [BR:
wna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KA717_20225 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UXE58410
UniProt:
A0A977KUA6
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Position
3991340..3992614
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AA seq
424 aa
AA seq
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MTQANELLTMTMTTEIVMELDLDIIEIDIDFDEDNLDNLNDSVLIEPDGKKPRKVTASRR
RDPSKKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARQIADLLHLELIREDLCKQLKREP
HDREWGKQVWKIEHTKQLLVEKNKREPKKSDIATYLAENQVDLEESWNFQADKNFSTFRR
RLYLDRKAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKF
STYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQKMHRKPTEEEIAEEM
EMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVAKNLLREDLENVL
DTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILK
EYIR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggctaatgagctactaacaatgacaatgacaaccgagattgtaatggaacta
gacctcgacattatcgagattgacattgacttcgatgaagataatttagataacctaaac
gactcagttctcattgaacctgatggcaaaaaaccaaggaaagtcactgcttctcgccgt
cgtgatccgagcaagaaaaagccctataccgaagactccattcggatttatttacaggaa
attggccgcatacgactattgcgagccgaagaagaaattgaactcgcacgccaaattgct
gacctcctccatttagaattgattcgggaagatctgtgtaagcagttgaaacgagagcct
catgatcgggagtggggcaagcaggtctggaaaattgaacacaccaaacaattactggtt
gaaaagaataaacgagaaccgaagaagtctgatattgccacttatttagctgagaatcag
gttgacctagaagaaagttggaactttcaagctgataaaaatttttctacttttcgccgc
cgtctttatttagaccgcaaagccaaggataaaatggtgcagtcgaacctccgtttagtg
gtatcgatcgccaaaaagtatatgaatcgaggtttatcgtttcaggacttgattcaagaa
ggttctttaggtttgatccgggccgcggaaaagtttgatcacgaaaagggttataagttc
tctacctatgctacctggtggattcgtcaggccattacgagagcgatcgccgatcaatcc
cgcaccattcgtctccccgtccacctctacgaaaccatttcccgtattaagaaaaccacc
aaaattctttcccaaaagatgcaccgcaaacccaccgaggaagaaattgcggaagaaatg
gaaatgaccattgaaaaattacggttcattgccaagtctgcccagctaccaatttcccta
gaaacacctatcggcaaagaagaagattcccgtctaggagactttattgaagcagatggt
gaaacgccagaggatgaggttgctaaaaacctgttacgggaagatctcgaaaatgtgctg
gataccctcagtccccgtgaacgagatgtgttacggttacgctacggtttagatgatggt
cggatgaagaccctagaagaaattggtcagatttttaacgttacccgtgaacgcattcgt
caaatagaagctaaggctttgcggaaattacgacatcccaatcgcaatagtattttgaaa
gaatacattcgctag
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