Woronichinia naegeliana: KA717_21060
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Entry
KA717_21060 CDS
T08482
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
wna
Woronichinia naegeliana
Pathway
wna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KA717_21060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wna03021
]
KA717_21060
03400 DNA repair and recombination proteins [BR:
wna03400
]
KA717_21060
Enzymes [BR:
wna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KA717_21060
Transcription machinery [BR:
wna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KA717_21060
DNA repair and recombination proteins [BR:
wna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KA717_21060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
Biotin_lipoyl
RPN1_C
Motif
Other DBs
NCBI-ProteinID:
UXE58543
UniProt:
A0A977PU06
LinkDB
All DBs
Position
complement(4160228..4164235)
Genome browser
AA seq
1335 aa
AA seq
DB search
MTFYNYTIDKGRLKKLIAAAFRTHGAARCSQLADELKALGFQFATKAGVSISVEDLTIPP
SKKDMLESAEKEIRITETRYARGEITEVERFQKVIDTWNSTSEELKDEVVRNFRETDPLN
SVYMMAFSGARGNMSQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISSYGAR
KGLVDTALRTADSGYLTRRLVDVSQDMIVREFDCGTERSLRVTAMIEADQVKIKLADRLI
GRLLAKDVVDKDGEVIAQRNQEMDEELAEKISRELQKKYDLSPELKSQTPEVWVRSPLTC
EAARSVCQCCYGWSLAHGKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARQ
VKAPAKGTVKWGPGLNTRKVRTRHGEEAEQVEVAGDLIWKGEGKKPQTQAISLTPGSLVF
VQNGDAVEADQLLTEVSLSKAQRSTERATKDVSTDLAGEVFFDKLVPEEKTDRQGNTTRI
AQRGGLIWVLSGEVYNLPPGAESVVQNGVEVQVGSVLAETKLTSVSGGVVRHLEGSREID
IITASVLLDQAQVKVESAGGREQYVIYTADGQRFLLKTAPGTKVTNHAIVAELIDDRYRT
TTGGLIRYGGIEVAKGTRKQGYEVTKGGTLLWIPEETHEINKDISLLIVENGQYLEGGTE
VVKDIFCQSSGVVEVIQKNDILREIIIKPGEYHLDVDPDAIKIEAGQLIQPGTEVLPGVV
VTELRQAEWIESTEGLGLLLRPVEEYTVFDEPAAPSQGSQNSDGGRQIELRSVQRLFFKD
GERVKSVEGSHLLSTQLVLEMSGDNVDSIAHLSADIELQDDEDEDCQRLQLVILESLVLR
RDTENDPHSGTTQTRLLIKDGDQIPAGAVVARTEIQCKEAGLIRGVKSGSESVRRVLIVR
DADIQTITVNEPPLVKEGALLVAASPLTSGVSISESGQVLKITEKGDSYEIKLRLARPYR
VSPGAVLHIDHEDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACILARKP
GVCQVEYMEDESVDVKIIEDDGTISEYPLLPGQNAMVADEQRVTVGDPLTDGPANPHEIL
DVFFSYYVDIKGVYEGALMGLQAAQKFLVNQVQMVYQSQGIDISDKHIEVIVRQMTSKVR
IDDGGDTIMLPGELIELRQVEQVNEAMAITGGAPARYTPVLLGITKASLNTDSFISAASF
QETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNNHEELLSMADSSEDTGYNRSS
SYNLLETVEQPIASRKSRLKVEDLDGDDHMVLDDNIARVYTGNRFRRTNDDNDDEELEEI
YEDDFGDDDDDYEDD
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgacattttacaactatacgattgataaaggtcgcctgaaaaagctgattgctgcggct
tttcggactcacggtgctgctcgttgttcccagttggcggatgaattgaaggctctggga
ttccagtttgcgactaaggcgggggtttctattagtgtggaggatttaaccattccgcct
agtaaaaaagacatgctggaaagtgcggaaaaggaaattcggatcacagaaactcgctat
gcgcggggagaaattacggaggttgaacgtttccagaaggtaattgacacctggaatagc
acctcagaagaactgaaagatgaggttgttcggaatttcagggaaacggatccgcttaat
tccgtctatatgatggccttctccggggcgcggggcaatatgagccaggtacgtcagttg
gtggggatgcggggcttgatggcggatccccagggggaaattatcgatttaccgatcaaa
accaattttcgggaagggttgacggtaacggagtatattatttcttcctacggtgcgcgc
aaaggtctggtagatacggctttacgaacggcggattcgggctacttaacccgtcgtcta
gtcgatgtttcccaggatatgatcgtgcgggaatttgactgtggtacggagcggagtttg
cgggtgacagccatgattgaggctgatcaagtcaaaatcaagttggccgatcgcctgatt
ggacgtttattagccaaggatgtggtggataaagacggcgaagtcattgcccaacgaaac
caggaaatggacgaagagttggccgagaaaatcagtcgagaacttcagaaaaaatatgat
ctatctccagaattaaaatcccaaacaccggaagtctgggtgcgatcgcccctgacctgt
gaagcggcccgttctgtttgtcaatgttgctatggctggagtttagcccacgggaagatg
gtggacttaggcgaagcggtgggaatcattgccgcccaatccattggcgaaccagggact
caattaaccatgcgaactttccacaccgggggagtttttactggggaagtggctcgtcaa
gtcaaggctcctgccaaaggaacggtgaaatgggggccaggactcaatacccgtaaagtc
cgtacccgtcatggtgaagaggccgagcaggtcgaagtggccggagatttaatctggaag
ggagaaggtaaaaagcctcaaacccaagccatttccctcacgcctggttctcttgtcttt
gtccaaaatggggatgcggtcgaagctgatcagctattaacggaggtttccctttctaag
gcccaacgttcaacggagcgggcaaccaaggatgtatccaccgatttagcgggggaagtt
ttctttgacaagttagtgccggaagaaaaaaccgatcgccagggcaacactacccgtatc
gctcaacggggcggactgatctgggtactctctggtgaggtttataacttaccccctggg
gcggaatccgttgtccaaaatggggtagaagttcaggttggcagtgtactggcagaaacc
aaactaacctccgtcagtggcggcgtggttcgtcatttagaaggtagtcgggaaattgat
attattacggcttcggtgctgctagatcaggcccaggtcaaggttgaaagtgccggtggt
cgggagcaatacgttatctatacggctgatggccaacgctttttactgaaaactgctcct
ggaacgaaagtcactaatcatgcgatcgtggcagaactgatcgatgatcgctatcgcacc
acaacgggagggttgattcgttatggaggcattgaagttgctaaaggaacccgcaaacag
ggctacgaagtgaccaagggaggaaccttactttggattcctgaagaaacccacgaaatc
aacaaagatatttccctgctgatcgttgagaatggtcagtacttagagggaggaactgaa
gttgttaaggatattttctgtcaatccagtggagtggtagaagtcatccaaaagaacgat
attctccgcgaaattattattaaaccaggagaatatcatctagacgtagatcccgatgcc
attaaaattgaagccggtcagctgattcaaccagggacagaagtcttacctggagtagtc
gtgaccgaattacggcaggccgaatggatcgaaagtacggaaggtttagggctgttgctg
cgccccgtcgaagaatatacggtgtttgacgaaccggctgctccttcccagggatctcag
aattctgatggcggacgacaaattgaactgcgttctgttcaacgtttattctttaaggat
ggtgaacgggttaaatcggttgaaggctcccatcttctcagtactcaattggtactggaa
atgtcaggcgacaatgtggacagtattgcccatttatcggcggatattgaactgcaagat
gatgaggatgaggactgtcaacgtctgcaactggtgattttagaatcccttgtcctgcgt
cgggatacggaaaatgatccccatagtggtacaacccaaacccgcctactgattaaagat
ggcgatcaaattccggccggggctgttgtggctcgcactgagatccaatgtaaggaagcg
ggtttgattcgcggtgtgaaaagtggcagtgaatcggtgcgtcgggtactgattgttcgg
gatgcggatattcaaaccattacggtcaatgaacctcccctcgtcaaagaaggtgctttg
ttagtggcagcttctcccttaaccagtggtgtctctatttctgaatcggggcaagtgctg
aaaattacggagaaaggggatagctatgaaattaaattgcgtttagcgcgtccttatcga
gtgtctcctggtgcagttttgcatattgaccatgaagatctcgtacaacggggagacaac
ttagtattactcgtgtttgaacgggctaaaactggtgatattattcaaggtttacctcgg
atcgaagaactgcttgaggctcgtaaacccaaagaagcttgtattctggcccgtaaacca
ggggtttgtcaggtagagtacatggaggatgaaagcgttgatgtcaagatcattgaagat
gatggtacgatcagcgaatatcccttgctaccaggccaaaatgccatggtcgccgatgaa
caaagggtgacagtgggagatcctctgaccgatggcccggccaatcctcatgaaatcctt
gatgttttcttcagttactacgttgatatcaaaggcgtatatgaaggggcgttgatggga
ttacaggctgcccagaagttcttggtcaatcaagtgcagatggtgtatcagtcccaaggg
atcgatatttccgataaacatattgaagtcattgttcgtcaaatgacctctaaggttcgt
attgatgatggtggtgacacaattatgttacctggggagttgattgaattgcgtcaggtg
gaacaggtgaatgaggctatggccattacgggaggtgcgccagcccgttatacccctgta
ctgctgggaatcacaaaagcctctttgaatacggatagctttattagtgcagcttccttc
caggaaacaactcgtgtgctaactgaagcggcgatcgaaggaaaatccgattggttgcga
ggtctgaaggaaaatgtgattattggtcgcctgattccggctgggacgggatttaataac
cacgaagagcttctcagtatggcagatagcagcgaagataccggatataatcgctcctct
agttacaatctgctggaaacagtggaacaacccattgctagtcgtaaatctcgtctcaag
gttgaagacttagatggcgatgatcacatggtgctagatgataacatcgctcgtgtctat
accggcaaccgttttcgtcgcactaatgacgataatgatgatgaggaactggaggaaatc
tacgaggatgattttggcgatgacgacgacgattacgaagatgattaa
DBGET
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