Woronichinia naegeliana: KA717_34795
Help
Entry
KA717_34795 CDS
T08482
Symbol
rpoC1
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
wna
Woronichinia naegeliana
Pathway
wna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KA717_34795 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wna03021
]
KA717_34795 (rpoC1)
03400 DNA repair and recombination proteins [BR:
wna03400
]
KA717_34795 (rpoC1)
Enzymes [BR:
wna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KA717_34795 (rpoC1)
Transcription machinery [BR:
wna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KA717_34795 (rpoC1)
DNA repair and recombination proteins [BR:
wna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KA717_34795 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
UXE60628
UniProt:
A0A977PVY0
LinkDB
All DBs
Position
6827425..6829311
Genome browser
AA seq
628 aa
AA seq
DB search
MKAQIEPRFDYVKIAIASPERIRQWGERTLPNGMLVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLNPGNASNLQYKQLLTGDQWVEIEDQIYAEDSE
LSGIEVGIGAEAIQRLLEELALEEEAERLREEILASKGQKRAKLIKRLRVIDNFIATNSL
PEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKIYQCGLPREMAIELFQPFVINRLIKLNIVNNIKAAKKLILRNDPQVWSVLD
EVITGHPIMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLACHNVLSPATGRPIVAPSQDMVLGCYYLTATNPKTQLGEGRYFANLED
VLKAYDQGQLSLHAAIWVRHKETDVVTEKPDNEVIKTETLEDGSVMKYYRERKTRETATG
ELLAQYIYTTPGRIIYNKTIHEALAVMV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccaaatcgaaccccgctttgactacgtaaaaattgcgatcgcttctcctgaa
agaattcgtcaatggggagaaagaaccctacccaacggaatgctggtcggtgaagtaacc
aaaccagaaaccatcaactaccgcaccctcaagccggaaatggatggtctgttttgtgaa
aagatttttggcccctcgaaagactgggaatgttggtgtggaaaatataagcgcgtcaga
catcggggcattgtctgcgaacgttgtggtgtggaagtcacggagtcgcgggtacgtcgt
catcgtatgggctttatcaaattagcagcccccgtcacccacgtttggtatctcaaaggt
attcccagttatctcagcattctgttggatatgcctttacgggatgtggaacagatcgtt
tattttaatgcctacgtggttctcaatccaggcaacgccagtaatctgcaatacaaacaa
ttactgacgggagatcaatgggtcgaaatcgaagaccagatctacgctgaagattctgaa
ctctctggcatcgaggtcggtattggagccgaagctattcaacggttattggaagaactg
gccctagaagaagaagcagaacgtttgcgggaagaaattctagccagtaagggtcaaaaa
cgggccaagctcattaaacgcttgcgggtaatcgataactttatcgccaccaattcccta
ccggaatggatggtactcagtgtgattcctgttatcccccccgatttacgcccgatggtg
caattagatgggggtcggtttgccacctctgacctcaatgatctctatcgacgagtgatc
aaccgcaataaccgtctagcccgcttacaggaaattttggcccctgaaatcattgtccgt
aacgaaaaacggatgctgcaagaagcggtggatgccctaattgataatggtcgtcggggt
cgtaccgtcgtcggagccaataaccgtcccctgaaatcgctgtcggatattatcgaagga
aaacagggtcgtttccgtcaaaaccttctgggtaagcgggttgactattcgggacgttcc
gtcatcgtcgttgggccaaacttaaaaatttatcagtgtggtctgcccagggaaatggcg
atcgagctattccaaccctttgttattaaccgtttgattaaactcaatattgtcaataac
attaaggccgccaaaaaattaattttgcgtaacgatcctcaagtctggtcggtgttagac
gaagtgatcacgggccatcccatcatgctgaaccgtgcgccaacccttcaccgtttgggg
attcaagcctttgagccaattctggtagaaggtcgagccattcaacttcatcccctggtt
tgtcccgcctttaacgctgactttgacggagatcaaatggcggtacacgttcctctgtcc
ttagaatcccaggcagaagctcgattactgatgctggcttgtcataatgtgctttctcca
gctacgggacggcccattgtggctccttcccaggatatggttttaggctgttactatctc
actgccaccaatcctaagacccagttgggagaaggacgctactttgccaatcttgaagat
gtgctcaaagcctatgatcagggacagttatccctccatgccgccatttgggttcgccat
aaggagaccgatgtcgtcactgaaaaaccagataatgaggtgataaaaacagaaacccta
gaagatggtagcgttatgaagtactatcgcgaacggaaaacaagggaaacggctacggga
gaattacttgcccagtatatttacaccacgccgggacggattatctacaataaaacgatt
cacgaagccttagcggttatggtttaa
DBGET
integrated database retrieval system
