Woronichinia naegeliana: KA717_36715
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Entry
KA717_36715 CDS
T08482
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
wna
Woronichinia naegeliana
Brite
KEGG Orthology (KO) [BR:
wna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wna03009
]
KA717_36715 (rlmD)
Enzymes [BR:
wna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KA717_36715 (rlmD)
Ribosome biogenesis [BR:
wna03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KA717_36715 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
Rap1_C_Sp
RrnaAD
Methyltransf_4
PrmA
Motif
Other DBs
NCBI-ProteinID:
UXE60918
UniProt:
A0A977KVX0
LinkDB
All DBs
Position
complement(7221086..7222450)
Genome browser
AA seq
454 aa
AA seq
DB search
MSNPTWQQGNLIELEITGLSNSGEGLGRFQERVVFVPDTVPGDRVLVRLVRLKKQYSYGQ
LQEILTPSPHRIRPNCIVADKCGGCQWQHIDIDYQRASKQQQIIDALERIGGFMDLAIAP
LLSSVDNLGYRNKVTYPLARSQSGQVQAGYYRRQSHHLINLNQCPVQDGRLNPFLKEIKQ
DIQSQGWSIYDESQQRGKLRHLALRIGRRTGEILLTLISASPSLPGLTEQAEIWLERYPE
LVGVALNCQPQHNNVIFGEETQIIVGRNSCREIFAGLEFELGPDTFFQIHTEAAESLLTA
IIGQLPLTGDEHLVDAYCGIGTFTLPLAQKVKSAIALEINTASVHQARRNAEINQITNVE
FQQGKVETLLPQLSQIPDIVLLDPPRKGCDHQVLETLVAHAPRTIVYISCQPATLARDLK
FLCQAVNYQLSWIQGADFFPQTAHVECAVILQRP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcccacttggcaacagggcaatttaatcgagttagagattactggtttaagc
aatagtggtgagggcttagggcgttttcaagagcgagttgtgtttgtccctgatactgtc
cctggcgatcgcgtcttggtgagattagtgcgattgaaaaaacagtatagttatgggcaa
cttcaggagattttaaccccatccccccatcgcattcgaccgaactgtattgtggctgat
aagtgtggcggctgtcagtggcagcatattgatatcgattaccaacgagcaagcaaacaa
cagcaaattattgatgccctagaacggattggtggttttatggatctggcgatcgcgccc
cttctcagttctgtcgataatttgggctatcgcaacaaagttacctaccccctggcccgt
tctcaaagtggacaagttcaagcgggttattaccgccgtcaaagtcatcatttgattaat
ctcaatcaatgtccagtgcaagatggtcgtcttaaccccttcctcaaggagattaaacag
gatattcagtcccagggctggtcaatttatgatgaaagccaacaacggggaaaactacgc
catctggctctgcggattgggcgaagaaccggcgaaattctacttaccttaatcagtgcg
agtccttctttgcctggtctcacagaacaggccgaaatctggttagagcgttaccccgaa
ctagtgggcgtagctctcaactgtcaaccacaacacaacaatgtcatttttggggaagag
acacagatcattgtcggtcggaatagctgtcgagaaatttttgcgggtttagaatttgag
cttggccccgatacctttttccaaatccacacagaagcagcggagagtttactaacagca
attattggacaattgccattaacgggagatgaacacctggtggatgcctactgtgggatc
gggacttttaccttaccgctcgcccaaaaggttaaatcggcgatcgctttagagattaat
accgcttctgttcatcaagcccgccgcaatgccgagatcaaccagattacgaatgtggaa
tttcagcaaggcaaagtagaaacgctattacctcaattgtctcaaatccctgacattgtg
cttctagatcctcctcgtaaaggttgcgatcatcaagtcctagaaaccttggtggcccat
gccccccgcacgattgtttacatcagttgccaacctgctaccctcgccagggatttaaaa
ttcctttgccaggcggtcaactaccaattgagttggattcagggagcagacttctttccc
caaacggctcacgtcgaatgtgcggttattttgcaaagaccctaa
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