Winkia neuii subsp. anitrata: PIG85_00580
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Entry
PIG85_00580 CDS
T08771
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wne
Winkia neuii subsp. anitrata
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wne03032
]
PIG85_00580 (topA)
03400 DNA repair and recombination proteins [BR:
wne03400
]
PIG85_00580 (topA)
Enzymes [BR:
wne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PIG85_00580 (topA)
DNA replication proteins [BR:
wne03032
]
Prokaryotic type
DNA Topoisomerases
PIG85_00580 (topA)
DNA repair and recombination proteins [BR:
wne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PIG85_00580 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
Motif
Other DBs
NCBI-ProteinID:
WCE46174
UniProt:
A0AB38XPI3
LinkDB
All DBs
Position
complement(146762..149515)
Genome browser
AA seq
917 aa
AA seq
DB search
MSQADKNSKLVIVESPAKAKTIAGYLGPSFHVLASVGHVRDLPKPSDLPADMKKGPYGKF
AVDVDDGFDPYYVVSPDKKKTVTQLRKALKEADELYLATDEDREGEAIAWHLLQVLKPKV
PVYRMVFHEITKDAISNALANTRELDTDLVDAQETRRVLDRLYGYEVSPLLWRKVQAGSS
AGRVQSVATRMVVDRERERIEFVPATYWYIAATLANDEGEFEAKLVELDGHRLATGRDFG
DDGQLTKKAQLAKVHVLQAEQASALGKALEKTSPYTVQKLDTKPYTRRPAAPFTTSTLQQ
EASRKLRMSSRQTMRVAQTLYENGFITYMRTDSTALSSQAIAAARKQASELYGATSIPAK
PRFYATKSKGAQEAHEAIRPAGAHFRSPDQVAGQISGAELRLYDLIWKRTVASQMNDARG
QTATVRIQADSSEGKATFSASGTVITDRGFLAAYEEGRDKDRYAKSAGENVRLPKLSEGD
TLQVKKVDYEDREHTTTPPPRYTEASLVKALEERGIGRPSTYAATIGVIGDRGYVLHRGQ
ALIPTWLAFSVTRLLEQNLPDLVDYDFTASLEEDLDKIAAGNADRKQWLGQFYFGADGSG
EVAGLKHAVSSLGDIDARTVNTIDLGEGVAVRVGRFGPYLEDKDGKRASIPDDVAPDELS
PEKVKELYAAAADDGRELGVYPNTGRTIVAKNGRFGPYVTEVIPEEEQGTGKKTIKPKTA
SLLKTQNLADITFEDALQLLSLPREVGTDPESGEVITAQNGRFGPYLKKGKDSRSLETEE
QMFTITLEEALKIYSQPKQRGRRAAKPPLRELGTDPATEKPVVIKDGRFGPYITDGTTNV
TVPRGESIEHLEVERAFQLLADKRAKGPRKKATKKTTKRSTAKKTTTKKTTTKKAATKKT
TAKKPAAKKTAAKKSSK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaggcagacaagaactcgaagctagtaatagtcgagtctccagccaaagctaaa
actattgctggctacttaggaccgtcttttcatgtgctggcatcagtcggccatgtgcgc
gacctgcctaaaccctccgacctacctgccgacatgaagaaaggcccctacggcaagttc
gcagtggacgtagacgacggcttcgacccctattacgttgtcagcccggacaagaagaag
acggttactcagctgcgcaaagctctaaaagaggccgacgaactctatctggcaacagat
gaggaccgcgaaggtgaagcgatcgcatggcacctactgcaggtgctaaagccgaaggtt
cccgtataccgcatggtgttccacgaaatcaccaaggatgccatttccaacgctcttgcc
aacacccgcgagctcgatactgacctggtggacgctcaggagacccgccgcgtgctcgac
cgcctgtacggttacgaagtgtctccgctactgtggcgcaaggtccaggctggctcttcc
gctgggcgcgttcagtctgtggcgacgcgcatggttgtagaccgcgaacgcgaacgcatc
gaatttgtgcccgcaacctactggtatattgctgctactttagcgaacgacgagggcgaa
ttcgaagccaagctggtagaactcgatggccatcgcctggctactggacgcgactttggc
gacgacggccagttgacaaagaaggcccagctggccaaggtgcacgtactgcaggcagag
caggcttccgccctcggcaaggcactggaaaaaacgtccccatacacggtccagaaactg
gacactaagccgtacacgcgcaggccggcggcgccctttaccacgtcgacgttgcagcag
gaggcttcccgcaagctgcgcatgtcctcgcgccagaccatgcgggttgcccagaccttg
tacgaaaacggtttcatcacctacatgcgtactgactccacagcgctgtcgtcacaggcg
attgctgcggcccgcaaacaggccagcgagctgtacggagccacctcgattcccgccaag
ccgcgcttttacgcaaccaaatccaagggcgcgcaggaggctcacgaagctatccgccca
gcgggtgcccacttccgttccccagaccaggtggccgggcagatcagcggtgcggaattg
cgtctttacgacctgatctggaagcgcactgtggcctcgcagatgaatgatgctcgcggg
caaacagctaccgtgcgcatccaggccgactcttccgagggtaaagccactttctcggcc
tccggcacggtcattaccgaccgcggcttcttggctgcttacgaagagggccgggacaag
gatcgctacgccaaatcggctggcgaaaacgtacgtttgccgaagctttccgagggcgac
acgttgcaggtgaagaaggtcgactacgaggaccgcgagcacaccactaccccgcctccg
cggtacacggaagcgtccctggtaaaagccctggaagaacgcggtattggccgcccctcc
acctacgccgctaccattggcgtgattggagatcgcggctacgtgctacaccgcggccag
gcgctaatccccacctggctggccttctcggtcacccgcctgttggaacagaacctgcct
gatctggtcgactacgacttcactgcctctttggaggaggacctggacaagatcgccgcg
ggcaatgctgatcgcaagcaatggcttggacagttctacttcggagcggatggatctggc
gaggtcgccggcctcaagcacgctgtttcctcgctgggcgacattgatgcccgcaccgtc
aacaccattgatctgggcgagggcgtggcggtacgcgtcgggcgtttcggcccctacctg
gaagataaggacggcaagcgcgcctccatcccggacgacgtggctccggacgagctgagc
cccgaaaaggtaaaggaactgtacgctgctgccgcagacgacggccgcgaactcggcgta
taccccaacactgggcgcactatcgtggctaagaacgggcgtttcggcccctatgtcacc
gaggtcattcccgaggaggaacagggcactggaaagaagacgattaagcccaagactgct
tcgctactgaagactcaaaaccttgcggacattactttcgaggacgccttgcagctgctg
tctctgccccgtgaggtcggcactgatccggaatctggcgaggtcattaccgcccagaat
gggcgtttcggcccctacctgaagaaggggaaagattcgcgttccttagagactgaagag
cagatgttcaccatcaccttggaagaggcactgaagatctactcccagcctaagcagcgc
ggtaggcgagcagcgaaaccgccccttcgcgagctaggcaccgatccggccactgaaaaa
ccagtagttatcaaggatggccgcttcggaccctacattactgacggcaccacgaatgtg
accgtgccgcgcggcgaaagcatagaacacctagaggtggaacgggccttccagttgctt
gccgacaagagggcgaagggcccgcgcaagaaggcaactaagaagaccacgaagcggagc
acagccaagaaaaccacaacaaagaaaaccactacgaaaaaggctgcaacaaagaagacg
acggcaaagaaacccgcagccaagaagacagctgcgaagaaatcatctaaatag
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