Winkia neuii subsp. anitrata: PIG85_02540
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Entry
PIG85_02540 CDS
T08771
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wne
Winkia neuii subsp. anitrata
Pathway
wne03420
Nucleotide excision repair
wne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PIG85_02540 (pcrA)
03430 Mismatch repair
PIG85_02540 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wne03400
]
PIG85_02540 (pcrA)
Enzymes [BR:
wne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PIG85_02540 (pcrA)
DNA repair and recombination proteins [BR:
wne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PIG85_02540 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
PIG85_02540 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
AAA_12
AAA_30
CarD_TRCF_RID
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCE46540
UniProt:
A0AB38XQB3
LinkDB
All DBs
Position
537743..540154
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AA seq
803 aa
AA seq
DB search
MESLFDALLPASSLKPTAAATLPQVMVESDQDYMDSLAQIQAPEADQVGEYSPSMQAEQI
TQGLNGPQEQAVTYQGGPLLVMAGAGSGKTRVLTRRIAYLLATGRARAGQILAITFTNKA
AAEMRERVQDLVGPAAKRMWVSTFHSACVRILRREHDLVGLKSTFSIYDSADQQRLLTLI
AKEKAVDLKKFSARTLSARISDLKNELITPSQYQERAGKDPLSRIVAQIYPLYQKRMQEA
NAVDFDDLIMLTVQLLGDNEGVASHYRRVFRHILVDEYQDTNHAQYVLVKLLVGPDGATP
PPAELTVVGDSDQSIYAFRGATIRNIEEFEKDYPKARTILLEQNYRSTQNILSAANAVIA
QNSGRRPKKLWTDLGSGDKIVVDAAESDRGEAIFVVDQINKLADEGYDWGDIAVFYRTNA
QSRIIEDVLMRDAIPYRVVGGTKFYERAEIKDAIAYLRAVSNPDDTVSIRRVLNVPRRGI
GAKAEGAIAAHASANGISFGAALEELDQVEGISTRAANSARKFAELLAAGRSRLEDGEGV
AEVLDYLLDESGYVQVLSESSDPRDEGRIENLAELHTVASEFDLSEPDGTLADFLERVSL
VADSDQVPSERGQVTLMTVHTAKGLEFPVVFVTGMEDGTFPHQRSMGDPAELAEERRLAY
VAITRARKRLYLTRAGSRNQWGAPVELPASRFLDDIPAELVDVRREFTPTQSIARSGDAF
GSGGWNPSHRAGTVRTNRMVPKAAKPAGKEIHLEVGDRVNHDAYGLGRVLALEGNWPNTT
AKVDFGDGTVKRLVLRFAPLEKL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtggaatctttgtttgatgctcttcttccggcaagttcgctgaaaccgacagcggcagcc
actttgccgcaggtaatggtcgaatctgatcaggactacatggactcgttggcgcaaata
caggcgccagaggccgatcaggtgggcgaatattcgccctcgatgcaggcagagcagata
acgcaggggctgaatgggccccaggaacaggcggttacttaccagggtgggccgctgctg
gttatggcaggggcaggatcgggtaagacccgggtgctcactaggcgaatcgcctacttg
ctggctactgggcgggcacgtgccgggcagatcttggccattaccttcactaataaggcg
gctgccgagatgcgcgaacgcgtccaggatctggtgggacccgccgcaaagcgcatgtgg
gtgtccacgttccactctgcctgcgtgcgcattttgcgccgcgaacacgacctggttggg
ctcaaatctactttctcgatctacgattcggctgatcagcaacggttgctgacgctgatt
gccaaagagaaggcggtagatctaaagaagttttctgcgcgcaccttgtcggcacgcatc
tcggatctgaagaacgaattaataacgccgagccagtaccaggagcgcgctggtaaagat
ccgctttcgcgcatagtggcgcagatttatccgctctaccaaaagcgtatgcaagaggcg
aacgccgtagattttgacgacctgatcatgcttacggtgcagctattgggcgataacgag
ggcgtagccagccactaccggcgcgtgttccggcacattctggtagacgaataccaggac
accaaccacgcccagtacgtgctggtgaaattgctagttggccccgatggggcaactccg
ccgcccgcagaacttaccgttgtgggcgattcagaccagtctatttacgctttccgtggg
gccacgatccgcaatatcgaagagtttgagaaggattatccgaaggcgcgcactattttg
ctggaacagaattaccgttccacccaaaacattttgagtgcggccaatgcggttattgcc
cagaattcggggcggcgtccaaagaagctgtggactgatttgggttctggcgacaagatc
gtggtcgatgctgctgaatctgatcgtggggaagcgatctttgttgtcgaccagatcaat
aagctggctgatgaaggctatgactggggcgacatagcggtcttctaccgcactaacgcg
caatctcgaatcattgaagatgtgctgatgcgcgatgctattccttaccgcgttgtgggg
ggaacaaagttctatgagcgggccgaaattaaagatgcgatcgcctaccttcgggccgtt
tcgaatccggatgacacggtgtccatccggcgcgtgctcaatgtgcccaggcggggtatc
ggagctaaagctgagggcgctattgcggctcacgccagcgcgaacgggattagttttggg
gcagcgctagaggaattggatcaggtagagggcatttcgacgcgggcagctaattccgcg
cgcaagtttgccgaattgctcgcggcagggcggtcacgactcgaagacggcgagggcgta
gctgaggtcctggactacctgctggacgaatcggggtacgtgcaggttcttagcgagtct
tcggatcctcgggacgagggcagaatcgaaaacttggcagaattgcacacggttgcttct
gaatttgatttgtctgagcccgacggcaccttggcggatttcttggagcgcgtctcgttg
gtagcggattccgaccaggtgcccagcgaacgcgggcaggtcacgctgatgaccgtccac
acggcgaaagggctagaattcccggtcgtatttgtgaccggcatggaagatggcacgttc
ccacaccagcggtctatgggcgatccggccgaactggcagaggaacggcggctcgcttac
gtggctattaccagggctcgcaaacggctttatctgacgcgggctggctcgcgcaatcag
tggggcgcgcccgtggaactgccagcttcgcgattcttagacgacattcctgccgagctg
gtagacgtgcgccgcgaatttacgcctacccagtccattgcgcgctcgggggatgccttc
ggttcggggggctggaacccatcccaccgcgccggcacagttcgcaccaaccgcatggtg
cctaaggctgctaagccggcgggcaaggaaatccacttggaggtgggggatcgagtcaac
cacgacgcctatgggttggggcgcgtcctcgccctcgaagggaactggcccaacaccacc
gccaaggtagatttcggggacggcacggtgaagcgtctcgtacttcgattcgctccgcta
gaaaagctttag
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