Winkia neuii subsp. anitrata: PIG85_04140
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Entry
PIG85_04140 CDS
T08771
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wne
Winkia neuii subsp. anitrata
Pathway
wne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIG85_04140 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wne03021
]
PIG85_04140 (rho)
03019 Messenger RNA biogenesis [BR:
wne03019
]
PIG85_04140 (rho)
Transcription machinery [BR:
wne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PIG85_04140 (rho)
Messenger RNA biogenesis [BR:
wne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PIG85_04140 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
SAP
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WCE46847
LinkDB
All DBs
Position
864524..866230
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AA seq
568 aa
AA seq
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MSTNNDLSSKRLPELQALAASMGLKGTSRMRKSDLIQKIQAASSSTDGGGQAEPRRQAKE
QETPEKAAASQDNLPKANGDDAQGLKNQDSREGRPRRSRRRRASSDAGAPKLDVKQELAR
EGKAETPSSSDEPKKVEDIKLPTGGKKHDDEERSGRRRRGRDRKRGRHDGNNNSHHNSNN
SNNSNNEVSEDDVLIPIAGILDVRDNHAFVRTSGYLPGPNDVYLSLGQVRRWGLRSGDAI
QGAVRQPREGERRRQKYNALVRLDAANGLTPEQTHERPQFKDLTPLYPDEQLRLETSPKA
ITPRVIDLVSPIGKGQRGLIVSPPKAGKTIILQQIANAISINNPEAHLMVVLVDERPEEV
TDMQRTVKGEVIASTFDRPASDHTIVAELAIERAKRLVELGKDVVVLLDSITRLGRAYNL
AAPASGRILSGGVDASALYPPKKFFGAARNVENGGSLTILATALVETGSKMDEVIFEEFK
GTGNMELRLSRALADRRIFPAVDVNSSGTRREEMLLRPEEMKILWKLRRILGSLDTQEAT
ELVLGKLRDTSSNAEFLLTIGKMSTSAD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactaataatgatctgagctccaagcggctacccgagctgcaagccctcgccgca
tctatgggcctgaagggcacttctagaatgcgcaaatctgatctgatccagaaaattcaa
gctgcttcgtcctcgaccgacggcggtggtcaagctgagccgcgccgtcaagcaaaggaa
caggaaacccccgaaaaggctgctgctagccaggataatctcccaaaggcaaatggcgat
gatgcgcaaggcctcaagaatcaggattcccgggaagggcgtcctcggcgtagtcgcagg
cgcagggcttcctccgacgctggcgcacccaagctggacgtgaagcaggaactggcgcgc
gagggcaaggctgaaactccgtcctcatctgatgaaccgaagaaggtagaagacattaag
ctgcccaccggcggcaagaaacatgatgacgaggagcgctctggacgtcgcaggcgcggg
cgggaccggaagcggggccgccacgacggcaacaacaattctcaccacaactccaacaat
tcgaacaactcgaacaacgaggtaagcgaagacgacgtgctgatccccatcgcgggtatc
ttggacgtgcgcgataaccacgcttttgttcgcacctccgggtacttgcccggtcctaac
gacgtgtacttgtcactggggcaggtgcgccgctgggggctgcgctccggcgatgcgatc
cagggtgcggtgcgccagccgcgcgagggcgaacgacggaggcaaaagtacaatgccctg
gttcgcttggatgcggctaacgggctgacgcccgagcagacccatgagcgcccgcagttc
aaggacttgaccccgctgtatccggacgagcagctgcggctggagacttctccgaaggct
attacgccccgtgttatcgacttggttagccccatcggcaagggacagcgcggacttatc
gtttcgccgcctaaggccggtaagacgatcattcttcagcagatcgccaacgctatttcg
atcaacaatcctgaagcccatctgatggtggttctggtagacgagcggcccgaagaagtt
actgatatgcagcgtacggtgaagggggaagtcattgcttcgaccttcgaccggccggct
tctgatcacaccatcgttgcggaactggcaatcgaacgggcaaagcgtttggttgaacta
ggcaaggacgtggtggtccttctggactccatcacccgtcttgggcgtgcctacaacctg
gctgccccagcttctgggcgcattctttccggcggtgttgatgcttccgccctctacccg
cccaagaagttctttggtgcggccaggaacgtggaaaacggcggttctcttaccattttg
gctactgctcttgtcgagaccggctccaagatggacgaggtcatcttcgaagagttcaag
ggtacgggcaatatggaattgcggttgtcgcgtgccttggcagatcgccgtatcttcccg
gcagtagacgtcaactcgtcgggcactcgccgtgaagagatgttgctgcgtcctgaagag
atgaagattttgtggaagcttcgcaggatccttggctcgctcgatacgcaggaggcaacc
gaactggtactaggcaagcttcgtgatacttcctccaatgctgagttcctactcaccatt
gggaagatgagcacgtcggccgattag
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