Winkia neuii subsp. anitrata: PIG85_05350
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Entry
PIG85_05350 CDS
T08771
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
wne
Winkia neuii subsp. anitrata
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wne03032
]
PIG85_05350
03400 DNA repair and recombination proteins [BR:
wne03400
]
PIG85_05350
Enzymes [BR:
wne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PIG85_05350
DNA replication proteins [BR:
wne03032
]
Prokaryotic type
DNA Topoisomerases
PIG85_05350
DNA repair and recombination proteins [BR:
wne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PIG85_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LYTB
FliT
Motif
Other DBs
NCBI-ProteinID:
WCE47074
UniProt:
A0AB38XS04
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Position
complement(1125305..1127725)
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AA seq
806 aa
AA seq
DB search
MKSLEHEDTDTIVDIDVSQEMQTSFLEYAYSVIYTRALPDARDGLKPVQRRILYTMSNMG
LLPTKGHVKSSRVVGEVMGKLHPHGDSAIYDAIVRLAQDFTMRLPLADGHGNFGSLDDGP
AASRYTEVRMAEASSDMVSNIAEDTVDMEPNYDSTLTQPSVLPAGFPNLLVNGASGIAVG
MATNIAPHNLGEVTAGARYLLANPDATTEDLMRFIPGPDLPCGGIIVGLDGIRDAYETGR
GVFKTRAKTSIERVSPRKHGIVVTELPYLVGPERVIEKIKEGVKRGRIKGLSNVSDLTDR
NHGLRIVIEVKNGFNPEAVLSQLFRHTPMEDSFGINAVALVDGQPQTLGLKKMLQVFLDH
RMEVVLRRSKYRLNKAQERLHLVEGLLIAVLDIDDVIAIIRASEDVASARERLKTAFDLD
DVQADHILALRLRKLTKFSRLELEGERDELMRDIATLQEIIENDQVRKDLVSKELAEVSD
RLSTPRRTLLLEDAGAVVPTASAKANLDLEVADDPCQLLLSTTGRLARVSGEESVSRTGS
RSPHDALAATLGTTVRAEVGLATSKGRMLRFNVLDTPSLPRTQDAPSLNAGMPAESLVDL
QKDERVIGLASLDPNSTIMGAISRSGQVKRIRPEYPVSKDEWIYMGLEDSDEVLCLVPAP
DEADAVLISSTGQLLRTPGQKIRPQGTSGHGVAGMSVQDGAVIAGTFTAEQDALVITVAA
LSTALPGTGQTSAKVTPLSEFPTKGRGGQGVRAQRFLKDEDCLEVAGVLADPRAVDSAGS
PVELPDINPKRDGSGSPLLNQIASIG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctctagagcacgaagatactgacaccatcgtcgatattgatgtttcccaggag
atgcagacatcttttttggaatacgcctactcggtgatctacacccgtgctctccctgat
gcccgtgacggtctcaaacctgttcagcgacgcatcctttacacgatgtccaacatggga
ctacttcccaccaaaggtcatgtcaagtcctcgcgagtggtcggcgaagtcatgggtaaa
ctccaccctcatggcgattcagcaatctacgatgccattgttcgacttgcccaggatttt
acgatgcgtctaccgcttgccgacgggcacggcaacttcggttcgctagacgacgggccg
gctgcctcccgttataccgaggtgcgcatggcggaggcttcctcggacatggtctccaac
atcgctgaagacaccgtagacatggagccaaactatgactccaccttgactcagcccagt
gttcttcctgcggggttcccgaatctactggtgaacggggcctctggcattgccgttggt
atggctaccaacattgccccgcacaatctcggagaggttaccgccggcgcgcgctatctg
ctggcaaatcctgacgctactacagaggatctgatgcggtttattccgggtccggacctt
ccctgtggcggaatcatagttggcctggatggcattcgtgatgcctacgaaactggccgc
ggcgtgtttaaaacccgagcgaagacatccatcgagcgagtcagcccacgtaagcatggg
atagtcgtcacggaactgccctacctggtaggtcccgaacgcgtgattgaaaagatcaag
gaaggcgtaaagcgaggccgcatcaagggcctctcgaacgtgtctgatctgaccgacagg
aatcacgggttgcggatcgttatcgaggtaaagaatggtttcaatccggaggctgttctc
tctcagctcttccggcatactcccatggaggattctttcggaatcaatgccgtcgctctt
gtcgacggccaaccgcaaacgctcggcctcaaaaagatgttgcaggtcttcttggatcat
cgcatggaggtagtactgcgtaggtccaaatatcgccttaacaaggcccaagagcggctg
cacttggtagagggcctactgatcgcggtcttggatattgatgacgtcatagccatcatt
cgtgcctccgaggacgtagcttcagctagggagcgtctgaagacggcattcgacctcgac
gacgtgcaggcagatcacatcctggcgctgcgtcttcgtaaactcacaaagttctcccgg
ctagaactagagggcgaacgcgatgaactaatgcgcgacatcgctactttgcaggaaatc
attgagaatgaccaggtccgtaaggacttggtatccaaggaacttgctgaggtctcggat
cggctttctacaccgcgccgaacccttctgctggaagacgcaggggctgtggtccccacg
gcatcagcgaaggccaacttggatctggaagttgccgacgatccctgtcagctcctgcta
tctactaccggccgcttggcccgtgtcagtggcgaagagtccgtaagtcgcacgggatcc
cgatctcctcacgacgcgttggctgccactctcggtacaactgttagggccgaagtcggg
ctagccacctctaaaggcaggatgctccggtttaacgttctggatactccatctttgccg
cgcacccaggatgcgccttctctcaatgccggcatgccggcggaatcattggtggatctg
caaaaagatgagcgcgtcatcggtttggcatcactcgacccaaactccacgatcatgggt
gctatatcacggagcggtcaggtgaaacggatacggccggaatatcctgttagcaaggat
gaatggatctacatggggctagaagattcagacgaggtgttatgcctggtacccgcccca
gatgaggccgacgctgtcctaatttcctctacggggcaactgcttcgtacccccggccaa
aagatccgccctcaaggcacatccggacatggcgtggcgggaatgtccgtgcaagacggc
gcagtaatcgccggtactttcactgccgagcaagacgcgttggttataaccgttgctgcc
ctgagtactgcgctacctggcaccggtcaaacttcagctaaggtaacccccctctcagaa
tttcccaccaaggggcgcggtggccagggtgtgcgcgcacagcgtttcctaaaggatgag
gactgtcttgaagtggcaggggttctagctgatccgagggcggtagattctgccggttcg
ccagttgaactgccggatatcaatccaaagcgtgacggttccggatctccgcttttgaac
cagatagcctcaatcggatag
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