Winkia neuii subsp. anitrata: PIG85_06405
Help
Entry
PIG85_06405 CDS
T08771
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wne
Winkia neuii subsp. anitrata
Pathway
wne03030
DNA replication
wne03430
Mismatch repair
wne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PIG85_06405 (dnaE)
03430 Mismatch repair
PIG85_06405 (dnaE)
03440 Homologous recombination
PIG85_06405 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wne03032
]
PIG85_06405 (dnaE)
03400 DNA repair and recombination proteins [BR:
wne03400
]
PIG85_06405 (dnaE)
Enzymes [BR:
wne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PIG85_06405 (dnaE)
DNA replication proteins [BR:
wne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PIG85_06405 (dnaE)
DNA repair and recombination proteins [BR:
wne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PIG85_06405 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WCE45298
UniProt:
A0AB38XLZ5
LinkDB
All DBs
Position
complement(1358546..1362124)
Genome browser
AA seq
1192 aa
AA seq
DB search
MAGMATDNFVHLHVHTDYSMLDGAAKISKLVAEAKRLDQPAVAITDHGYLFGAYELYNEC
QKAGIKPIVGLEAYLTPGTSRFDNTRVQWGTREQQAAGDDVSARGAYTHMTLLSRTTEGM
HNLFRMASMGSIEGQMAKWPRIDRELIEKYSSGLIGFTGCPSSEVQTRLRLGQWEEAVRA
AGEYQDIFGKENYFVELMDHGLDIERRVKKELLELAKTIDAPLVATNDSHYVRKEDRDYQ
DALLCINSGKRLDDPGRFKFDGSDYYLRPASEMREIFRELPEACDNTLLIAEMCDVHFKT
VDEGANFMPTFPVPEGETLESWFVKEVARGADKRFPGGVPEAEQKQIDYEISVITSMGFP
GYFLVVADYINWAKDHGIRVGPGRGSGAGSIVAYCMGITELNPLEHGLMFERFLNPERVS
MPDIDVDFDDKRRGEVIKYVEDKYGKDKVSQVITYGTIKTKQALKDSARILGKPFVVGEK
LTKELPPTIMGKDISVHGIFDPADKRYGEAKSFRDMVAADKPGGAEYWGYQEVVDMALGI
EGLTRQWGVHACAVIMSSHTLTDIIPMMKRLADGAIITQFDYPTCEHLGLLKMDFLGLKN
LTIISDCLENIKLNGKEELDLENVSLEDPATYALLGRGETLGVFQLDGGGMRNLLRLMKP
TSFADISAVGALYRPGPMGAGSHTNYALRKNGQQRIEPIHPELAEPLEDILSETHGLIVY
QEQVMKIAQKLAGFTLGQADILRKAMGKKKADVLAQQFEGFRAGMLNNGYSDDSITTLWE
ILVPFASYAFNKSHSAAYGLVSYWTAYLKANYPVEYMAALLTSAGANKDKLPIYLGECRH
LGIEVLVPDVNESSANFTPVGEKIRFGLASVRNVGLPVVEGIEQARTEQGRFESFNDFLK
KVPQTVCNKRTIESLIKGGAFDSLGATRRSLELKHEEAVESIIGIKRNEAAGQFDLFAGL
GEEAEEVGGGFRVEIPDLPEWDRKEKLGFEREMLGLYVSDHPLAGQEMGLSQNSDASISD
IKEDESRPDRSRVTIAGLITNVQRRTTKTGNLWAIVTIEDLSGSIESQFFPSTYQTVSER
LQPDQIVSVTGRLSRREGGVELNAESMKILELTRTGDEPVTLAMHMNNCTRPLLESLKQI
FQAHPGPAPVNLRLSGAGRTVVAECDASLKVKPEASLFAELKELLGPNCLAE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatggctaccgataactttgtgcaccttcatgtccacaccgattattcgatg
ctcgatggcgcggccaagatttcgaaactggttgccgaagccaagagactggaccaacct
gcagtagccatcactgatcacggctacctgttcggggcctacgaactttacaacgaatgt
cagaaggcggggatcaaaccgatcgtcggactagaggcatatctgacccccggtacttcc
cgctttgacaacaccagggtgcagtggggcactagggaacaacaggcagccggcgatgat
gtgtctgcacgcggcgcctacacccacatgactttgctgtcgcggacaacggagggcatg
cacaacctgttccgcatggcctcaatgggctccattgaggggcagatggcgaaatggcct
cgcatcgaccgcgaactgatagaaaagtattcctctggcctgatcggctttactggctgc
ccgtcctcggaagtgcagactaggttgcgactcgggcagtgggaggaggccgtgcgtgcc
gctggcgaataccaggatattttcggtaaagagaactatttcgttgagctgatggaccac
ggcctggatattgaaaggcgcgtaaagaaggagctgctcgagctcgctaagactatcgat
gctcccttggtggcgaccaacgactcccactacgttcgtaaggaagaccgcgactatcag
gacgcgctgctgtgcatcaactcgggtaagcggctagacgatccgggtcgtttcaaattt
gatggctctgactactatctgagacctgcttcggagatgcgggagatctttagggaactg
ccggaagcgtgcgacaatactttacttattgccgagatgtgcgacgtgcacttcaagacg
gtcgatgaaggtgctaacttcatgccgacgttccccgtgcccgagggcgaaaccttggaa
tcctggttcgtaaaggaggtcgcccgaggggcagataagcgcttcccaggcggagtgcct
gaagccgagcagaagcagatcgactacgagatctcggtcattacctccatgggatttccg
ggctacttcctggttgttgccgactacatcaactgggctaaagaccacggtattcgagtc
ggacccggacgtggttctggcgcaggctccatcgtcgcctactgtatgggcatcacggag
ctcaatccgctagaacacgggctgatgttcgaacgtttcttgaaccctgagcgcgtctct
atgcctgatattgacgtcgacttcgacgataagaggcgcggcgaagttatcaaatacgta
gaagataaatatggcaaagacaaagtgtcccaggtgatcacctatggcacgatcaaaacg
aagcaggcactaaaggactctgcccgtatccttggcaaacctttcgtggtaggggaaaag
ctcactaaggaattgccgcccacgatcatgggcaaggacatttcggtgcacggcattttt
gatccggccgataagcggtatggcgaagctaagtctttccgcgacatggtggctgccgat
aagcccgggggagcagaatactggggttatcaggaagttgtggatatggcactcggcatt
gaggggctgacccgccagtggggtgtgcacgcctgtgcagtgatcatgtcttcgcatacg
ctcaccgacatcattcccatgatgaaacgcttagctgacggggcgatcattacccaattt
gattatccgacttgcgagcatctgggattgctgaagatggacttcttgggactcaagaac
cttaccatcatctctgactgtctcgagaacataaagctgaacggcaaggaagagctcgac
ctcgaaaacgtttcgctggaggacccagcaacgtacgcactgttgggacgtggcgaaacc
ttaggcgtattccagcttgatggcggcggcatgcgtaatctgctccgtctgatgaagcca
acctctttcgctgacatctcggcagtgggtgcgctttaccgcccgggcccaatgggggcg
ggctcgcatactaactatgccctgcgcaagaatgggcagcagcggattgagccaattcac
cctgaattggctgagcctctagaggacatcctgtctgagacccatggcctgatcgtgtac
caggagcaggttatgaagatcgcccagaagctggcgggcttcactctggggcaggcagat
attttgcgtaaggcaatgggtaagaagaaagctgacgtgctagcccagcagtttgagggc
ttccgggcaggcatgctgaacaatggctattcagatgactcgattactacgttgtgggaa
atcctggttccctttgcgtcgtacgcgttcaacaagtcgcactcggctgcctacggtttg
gtgtcgtattggacggcctacttgaaggcgaactatccagttgaatatatggcggctttg
ctaacctcggctggcgcgaataaggataagctgccgatctatttgggtgaatgtcgccac
ctcggcattgaggtgctggtccctgacgtgaacgagtcttcggctaacttcacccctgta
ggagagaagatccgcttcggactggcttctgtgaggaacgttggtttgccggtggtagag
ggcattgagcaggcacgcaccgagcaaggtaggtttgagtccttcaacgatttcctaaag
aaggttcctcagaccgtttgcaacaagcgcaccatcgagtctctgatcaagggtggcgcc
ttcgactctttgggcgccactaggcgttccttggagctgaagcatgaagaggccgtcgaa
tccatcattggcattaagcgcaacgaggcagccgggcagtttgatctgtttgccggtttg
ggggaggaagccgaggaggtcggcggcggtttccgcgtggagatcccggacctgcccgaa
tgggacagaaaggaaaagttgggcttcgaacgcgagatgctcggactgtacgtctcggat
cacccgcttgccggccaagagatgggcctgtcgcagaactctgatgcttccattagcgat
attaaagaggacgaatcgcgcccggatcgctctagggtaacgattgctgggctaattact
aacgtgcagcggcgtactaccaagaccggtaacctgtgggcgatcgttactatcgaggac
ttgtctggatccattgaatcgcagttcttcccgtccacctatcagacagtttcggaacgg
ttacagcctgaccagatcgtgtctgttacgggccgcctttctcgacgcgagggtggggtg
gagctgaacgctgagtccatgaagattctggagctcactcgtaccggtgatgaaccagtg
accttagccatgcacatgaataattgcacgaggcctctgttagagtccttaaagcagatt
ttccaggcccatcctgggcctgcgccggtgaatctaaggttgtctggtgctgggcggaca
gtggttgctgaatgtgacgcctctcttaaggtaaaaccagaggcatccttgttcgccgaa
ctgaaggagctgcttggacctaattgtctagcggaatag
DBGET
integrated database retrieval system
