Winkia neuii subsp. anitrata: PIG85_06675
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Entry
PIG85_06675 CDS
T08771
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wne
Winkia neuii subsp. anitrata
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wne03016
]
PIG85_06675 (truB)
Enzymes [BR:
wne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PIG85_06675 (truB)
Transfer RNA biogenesis [BR:
wne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PIG85_06675 (truB)
Prokaryotic type
PIG85_06675 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WCE45349
UniProt:
A0AB38XMC2
LinkDB
All DBs
Position
complement(1417445..1418389)
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AA seq
314 aa
AA seq
DB search
MRLEVPRGQHPAAPGFVVIDKPAGCTSHDVVSAVRRLACTRKVGHAGTLDPDATGVLVVA
VGAGTKLLRYLTGADKQYLARVRFGISTTTEDASGEVTQALGARLSAEQIENAASRLRGN
IMQVPSAVSAIKVQGKRSYELVREGKEVALEARPVTIDELELTSEPQQVRAQVPVTDISI
RVTCSSGTYIRALARDLGEALGCGAHLTYLRRTRVGGFTLDQAVQLSDALVDGGLPTISL
SEVAARFFRTMVLSPQQVEDVRCGRRLHVAEGAEGTWAMLDGTNKLVGMATLSAQGDGWR
LQPKTVIPQEGSNG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgaagtaccccgggggcagcatccggctgctcccgggtttgtcgtaattgat
aagcccgccggatgtactagtcatgatgttgtatcggctgtacgcaggctagcctgcacc
cgcaaagtgggccacgccggaacccttgaccccgatgcaacaggagtcttggtggtggcg
gtaggcgccggaacgaaactgttgcgctaccttacgggcgcagataagcagtatcttgcc
cgcgtccgcttcggcattagcacaaccacggaggacgcctccggagaggttacccaggca
ctgggagcaaggctatctgcagaacagatagaaaatgctgcaagccgtcttcgcggcaat
attatgcaggtgccctctgcggtatcagcaataaaagtgcagggtaaacgctcctatgag
ctcgtccgcgaaggcaaagaagtcgccctcgaggcgcgtccggtaaccatagatgaactg
gaactaacctcggagcctcagcaggtgcgcgcccaagttcccgtcacagacatttcgata
agggtgacttgctcttccggaacttacattcgtgctcttgcaagagacctgggggaggca
ctgggatgcggggcacacctaacctatctgaggcgtactcgcgtaggcggctttacccta
gatcaggcagtgcagctttcggatgcgcttgtagatggcggattgccaaccatttcactg
tccgaggtcgccgcgcggttcttccggaccatggtcttgagcccgcaacaagtggaagat
gtccgctgcggacggcggctgcacgttgccgagggcgcagaaggcacctgggcaatgctg
gatggaacaaacaagctcgtaggtatggcaacattaagtgcgcagggcgacggctggcgc
ctccaaccgaagacggtaattccacaggaaggatccaatggctga
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