Woeseia oceani: BA177_07625
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Entry
BA177_07625 CDS
T04427
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
woc
Woeseia oceani
Pathway
woc03030
DNA replication
woc03430
Mismatch repair
woc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BA177_07625
03430 Mismatch repair
BA177_07625
03440 Homologous recombination
BA177_07625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
woc03032
]
BA177_07625
03400 DNA repair and recombination proteins [BR:
woc03400
]
BA177_07625
Enzymes [BR:
woc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BA177_07625
DNA replication proteins [BR:
woc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BA177_07625
DNA repair and recombination proteins [BR:
woc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BA177_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANO51088
UniProt:
A0A193LF45
LinkDB
All DBs
Position
1725006..1728524
Genome browser
AA seq
1172 aa
AA seq
DB search
MSKPFVHLHLHTEYSIVDGTVRIPALMQRCEDTGMPAVALTDQNNIFALVKFYRKALAHG
IKPIIGADLRIRRDEEGGLYDGLVLLCQNQQGYQNLTTLVSRCYLEGQYRGVPMAHRDWL
DADNCKGLIALSGGMHGDVGRALTNGHEDEAEAMLERWQGVFGDRYYLELTRTGRSGEAS
CMQRSLQLASRRGVAVVASNDVRFLDASDFNAHEARVCIHDGRTLDDASRTRKYSAEQYL
RNGDEMAALFADVPEAISNSLEIARRCNLNLTLGQSVLPAFPVPEGQTTEEFLRAESERG
LEQMLRRKALADKIPQERLEAIATPYRQRLVSELDVICEMGFPGYFLIVADFIRWAKEQE
IPVGPGRGSGAGSLVAYVLGITDIDPLQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVI
DYVAERYGRERVSQIITYGTMAAKAVVRDTGRVLGHPYGFVDRIAKQIPFEIGMTLDKAL
EQEAELAAMYKDDDEVRGLIDLARSLEGLARNAGKHAGGVVIAPGKLTDFTPLYCEEGGI
NVVTQLDKDDVEAAGLVKFDFLGLKTLTIIDWAVRIVNADRADNPLDIASLPMDDALTFE
QLRACNTTAVFQLESRGMRDLIKRLKPDQFEDLIALVALFRPGPLQSGMVDDFITRKHDL
NKADIDYLHPDLTTVLGPTYGVILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
KQREIFVDGATERGVEKATATRIFDLMEKFAGYGFNKSHSAAYALLSYQTGYLKAHHPEA
FMAAVMTADIDNTDRLVMLKDDCRQLGIRLLPPDINRSAYEFGVAGERQILYGLGAIKGV
GRSAVESMIREREERGPYSSLVEFVRRIDLDRVNRRALEAMIKSGALDGFANSRRGLIEQ
LPEAIKSAGQAARAAAAGQNDMFGLAEVATPEPVPEMTSTLREWADVERLKNEKEALGLY
LTGHPFDAVRGDAGYFVDGRLGDIGSEPAPQSNGERNFAQARREVTVAGLIMDIRKRGNR
VTVVLDDDTGRLELSLFGEAFQEFRDLLAKDEIVVVSGGLRYDDFSASWQVNAKNILPID
RVIEQRARSMILRLQPNGQGQNMLAQLHDVLLPYRKGHCDVAVQYTGTGARARLSLGADW
NVRPSRELRDKLTELLGRDSVRLLYAPSREMM
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcctttcgtacatttgcacttgcacactgagtactcgattgttgacggtact
gtgcgcatccctgcgctgatgcaacgctgtgaagataccggcatgccggcggtggcgttg
acggatcagaacaatatttttgcgctggtcaagttttatcgcaaagcgctggcacacggt
atcaaacccatcattggtgctgatctgcggattcgccgcgacgaggaaggtgggctgtac
gacggcctcgtactgctgtgccaaaaccagcagggatatcaaaacctgacaacactggtc
agtcgctgttacctggaagggcagtaccgcggcgtgccgatggctcaccgcgactggctt
gatgccgacaattgcaaaggcctgatcgctttgtccgggggaatgcacggagacgtaggt
cgtgcgctgaccaacgggcatgaagatgaagccgaggccatgctcgagcgttggcagggt
gtattcggcgatcgttattatctggagttgacccgtaccggacggagtggcgaagcgagc
tgtatgcagcgcagcctgcagcttgccagcaggcgcggtgtcgccgttgttgcgtccaat
gacgtgcgcttcctggatgccagtgattttaatgcgcacgaggccagggtctgcattcac
gatggccgcacactggacgatgccagtcgtacccgcaaatacagtgccgaacagtatttg
cgcaacggcgatgagatggcggcgttgttcgctgacgttccggaggctatcagcaattcg
ctggaaatcgcgcgccgttgcaacctgaacctgaccctggggcaatccgtgctgccggcc
tttccggtaccggaagggcagactacggaggagttcctgcgcgccgaatcggagcgcggc
ctggagcaaatgctcaggcgcaaagcgctggcggacaaaatcccgcaggaacgcctcgaa
gcgatagcgacgccataccggcaacgactggtttcagagctggacgttatttgcgagatg
ggttttccgggctacttcctcatcgttgctgattttattcggtgggccaaggaacaggaa
attccggtcggtcccggacgtggttccggtgcgggctctctcgttgcgtatgtactcggc
attaccgacattgacccgctgcagtacgacttgctgttcgagcgtttcctgaatccggag
cgcgtgtccatgcctgactttgacgttgacttctgtatggaagggcgtgaccgggtcatc
gattacgtggcggaacggtacggccgggaacgggtttctcagatcattacctatggcacg
atggctgccaaagccgtcgtacgcgatacaggacgagtgctgggacatccctacggattc
gttgatcgtatcgcaaagcagattccgttcgagatcggcatgacgctggacaaagcgttg
gagcaggaagccgaactggcggcaatgtacaaagacgacgacgaagttcgcggcctgatc
gatctggcgcgttcactcgagggtctggccagaaacgcgggcaaacatgccggcggtgtt
gtcattgcgccgggcaagttaacggatttcacgccgctctattgtgaagagggcggcatc
aatgtcgtcacgcaactcgacaaggacgacgtagaggcagcagggctggtcaagttcgac
tttcttggcctgaagacgctcaccatcatcgattgggcagtgcgcatcgtcaatgctgac
cgtgccgacaacccgctggacatcgcgagcttgccgatggacgacgcactgacgttcgag
cagctgcgtgcctgcaatacgaccgcggtcttccagcttgaatcgcgcggcatgcgcgac
ctgatcaagcgcttgaagcccgaccagttcgaggatttgatcgccctggtcgcactgttc
cgcccgggtcccctgcagtcgggcatggttgatgatttcatcacccgcaagcatgacctg
aacaaagccgacatcgattacctgcacccggatctgaccaccgtgctggggccgacgtac
ggcgtgatcctgtatcaggaacaggtcatgcagattgcccaggtgctcgccggttacacg
ctgggtggcgcggacctgctgcgccgcgcgatgggcaagaaaaagcccgaggaaatggcg
aagcagcgcgagatctttgttgacggcgctaccgagcgcggtgttgagaaagccacggca
acgcgtattttcgacttgatggaaaagtttgccggctacgggttcaacaagtcacattcg
gccgcgtatgccttgctgtcctaccagactggctatctgaaggcgcatcaccccgaagct
ttcatggcggccgtgatgaccgccgatatcgacaataccgatcgcctggtcatgctgaaa
gacgactgtcggcagttgggcatcaggctgttgccgccggacatcaaccggtcggcctac
gagtttggtgtggccggcgaacggcagattctgtacggcctcggcgccatcaaaggcgtt
ggtcgtagcgcggttgaatcgatgatccgggagcgcgaagaacgtggcccgtactcaagc
ctcgtcgagttcgtgcgccggattgaccttgatcgggtcaatcgccgggcgcttgaagcg
atgatcaagtccggtgcgctggacgggtttgccaattcccgccgcggtcttatcgagcaa
ttgccggaagcgatcaagagcgcggggcaggcggcacgtgctgccgctgccgggcagaac
gacatgttcggtctcgccgaagttgcgactccggaaccggttccggaaatgacgagtacg
ttgcgcgaatgggccgacgtcgaacgactgaagaacgaaaaagaagcgcttggcctctac
ctgacgggacatccatttgacgcggtgcgcggagatgccggttactttgtcgatggacgg
ctgggtgacatcggctcggagcctgcaccgcaaagcaacggggagcggaatttcgcgcag
gcccgtcgtgaagtgaccgtcgccggattgatcatggatatccgcaaacgcggtaatcgg
gtaaccgtcgtgctggatgacgacaccggccggctggaactgtccttgttcggcgaggcc
tttcaggagtttcgcgatctgctcgccaaagacgagattgttgtggtttccggtggcttg
cgttacgacgatttcagcgcaagctggcaggtcaatgccaagaatatattgccgattgac
cgggtcatcgaacaacgagcgcgcagcatgattttgcgactgcagccgaacgggcaaggg
cagaatatgctcgcgcagttgcacgatgtgctgttgccctatcgcaaagggcattgtgat
gtcgcggtgcaatataccggcacgggtgcgcgggcgcggctatcgctgggtgcggactgg
aatgtgcgcccgagcagggagttacgcgataaactgaccgaattgttagggcgggatagc
gtacgactgctctacgcacccagcagggaaatgatgtag
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