Woeseia oceani: BA177_07940
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Entry
BA177_07940 CDS
T04427
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
woc
Woeseia oceani
Pathway
woc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA177_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
woc03019
]
BA177_07940
03009 Ribosome biogenesis [BR:
woc03009
]
BA177_07940
Enzymes [BR:
woc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BA177_07940
Messenger RNA biogenesis [BR:
woc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BA177_07940
Ribosome biogenesis [BR:
woc03009
]
Prokaryotic type
rRNA processing factors
BA177_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ANO51143
UniProt:
A0A193LFA0
LinkDB
All DBs
Position
complement(1788481..1791309)
Genome browser
AA seq
942 aa
AA seq
DB search
MKRMLINATQEEELRMAMVDGQRLFDLNIEAPASERKKANIYKGKITRIEPSLEAAFVNY
GAERHGFLPLKEISSEYFVKDAPSGKVNIKDVLREGQDIVVQIDKEERGNKGAALTTFVS
LAGRFIVLKPNKERSGGVSRRITGDDRDEARKSLKNVNIPDGMSVILRTAGIDRTSEELA
WDLENLLNVWNAILKVVVERPSPFLIYRESNAVVRALRDYLTNEIGEILIDDEATYIEAS
EFVQQVMPHNQRKLKHYTDPVPLFTRYQIESQIESAFAHLVHLPSGGSLVIDHTEALVSI
DINSARATKGGDIEATALNTNLEAADEVARQLRLRDLGGLVVIDFIDMGPQKAQREVENR
LREAVRQDRARVQIGKISRFGLMEMSRQRLRPSLGESAYLTCPRCSGIGNIRSVESLALA
ILRIIGEEARKERTAKVIAQLPVEVATYLLNEKRDWVQNLEARNDTQVVLVANEGLETPH
YRIRRVRDDQLELPENTGSSYTLSDPEDEDAIPDSLQERKPAEQAAVTTVVATTPAPPRP
VAAAAPAPRAPGFLARLAALFAGSSSSEEKDKKPAKGGRKAGAAKRSRKTSDGRGRGGKR
DGRRADESADSKDSNKPRGEKKRGGSKKRGKKSEARNDERKSKNEQNGQSDAADKRKEPK
AEADGDEARQEQPRKKRRSRGGRRRRKSADRTENQTDNAQQGNESADVTQKEPANKAAAE
QSAEQRPAAKSPANGAAESASATNDQPGNGQSRRASAASEKAPAPQPASSEKPDAAKAAA
TTAVASAVAPVAKAKPADYEDTQPELPRLRMSDAEVREAQRSDTGSAETPKKRAAPRDTA
KTETPVAESGAAARDSGHPASSPAEPVKEPAKEPAQEPANHAVPPAASKPVEPVKPAADK
PAAEAAPAKPKPEGRLLPWDQPQSAAPSSAETKASEDKPSQS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcaggaagaagagttgcgcatggcgatggtcgat
ggccagcgcttattcgacctcaatatagaagcacccgccagcgaacgtaaaaaggcaaac
atctacaaaggcaagatcacccgcattgagcccagcctcgaagcagcctttgttaactac
ggcgcagaacgccacggattcctgccgctaaaagaaatctccagcgagtacttcgtcaaa
gacgcccccagcggcaaggtcaacatcaaggatgttctgcgtgaaggtcaggacatcgtc
gtccagatcgacaaggaagaacgcggtaacaaaggcgccgcgctaacaacctttgtcagt
cttgccggccggttcatcgtcctgaagcccaacaaagaacggtccggcggtgtctcgcgc
cgtatcactggcgacgatcgcgacgaagcgcgaaaatcactgaagaacgtcaatattccg
gacggcatgagcgtgattctgcgcaccgccggcattgaccgtaccagtgaagagctggca
tgggacctcgagaacctgctgaatgtgtggaacgccattctcaaagttgtcgtcgaacga
ccgtccccgtttcttatctaccgtgaaagcaacgccgtcgtccgcgcattgcgcgattac
ctcaccaatgagatcggtgagattctgatcgacgacgaggcgacctacattgaggccagc
gagtttgtgcagcaggtcatgccgcacaaccagcgcaagctcaaacactataccgaccct
gtaccgctgtttacgcgctaccagatcgaatcgcagatcgaatccgcgtttgcgcatctg
gtgcacctgccatccggcggcagcctggtgatcgaccataccgaagcactcgtttccatc
gacatcaactcggcacgcgcgaccaagggcggcgacatcgaagcgactgcgttgaacacc
aacctggaagccgccgacgaagtggctcgccagttacgtctgcgcgaccttggcggactg
gtggtaattgacttcatcgacatgggcccgcagaaagcgcaacgcgaagttgagaatcgg
ctgcgcgaagcggtacgtcaggatcgggcacgcgtgcagatcggcaaaatatcccgattc
ggcctgatggaaatgtcgcggcaacgcctgcggccttcgctcggcgaatcagcctacctc
acctgccctcgttgcagcggcataggcaatatccgcagtgtcgaatcgctggcactggcc
atcctgcgcatcatcggcgaggaagcgcgtaaggaacgcaccgctaaagtcatcgcccag
ctgccagtggaagtcgcaacgtacctgctcaatgaaaaacgcgactgggtacagaacctg
gaagcacgaaacgacacgcaggtggtattggtcgcaaatgagggtctggaaactccgcat
taccgaattcgacgggtacgtgacgaccagctggaactgccggagaataccggcagcagt
tacacgctttctgatcccgaagacgaagatgctattcccgacagcttgcaggaacgtaag
ccggcggaacaagccgcggtaaccacggttgttgcaacaacacccgccccgccgcggccg
gttgctgccgcagcgccagcgccgcgcgcgcccggtttcctggctcgcctcgccgcactg
ttcgcgggctcctcgtcgagtgaggaaaaagacaagaagccggccaaaggcggtcggaaa
gccggcgccgcgaaacgttcgcggaaaacgtcggacggccgaggtcgaggcggcaagcgc
gacggtcggcgggctgacgaaagtgctgacagcaaagacagcaacaagccgcgcggcgag
aagaagcgcggcggttccaagaaacgcggcaagaagtcggaagcgcggaatgacgagcgc
aagtccaagaacgagcagaacggtcaaagtgatgccgccgacaaacgcaaggagccgaag
gccgaggctgatggcgacgaagcgcgccaggaacagccacgcaagaagcgccgtagtcgt
ggcggccggcgtcgtcggaaatccgcggaccggactgagaatcaaacggacaacgcacaa
cagggcaatgagtctgccgatgtaacgcagaaagaaccggcgaacaaggcagctgccgaa
caaagcgccgagcagcgccctgccgccaagagcccggccaatggagccgccgagtcggcc
agtgcgactaacgatcagccaggcaacgggcaatcacgacgagcaagcgcagcgtcagag
aaagcaccggcgccccaaccagccagcagcgagaaaccagacgccgcgaaagcggcggct
actaccgcggttgcaagtgctgtggcaccggttgcgaaagcgaagccagctgactatgaa
gatacccagccggagcttccgcggctgcgcatgtctgatgccgaagtacgcgaggcacaa
cgcagcgatacgggcagtgctgagacgccgaagaaacgagcggcaccacgggacacagcc
aagacggaaacgcctgtcgccgaatcaggcgctgcagcccgcgattccggtcacccggct
tcctcaccagcagaacccgtaaaggagccagcgaaggaaccagcgcaggaaccagcaaat
cacgcggtcccgcctgcggccagcaagcctgtggaaccggtaaaaccggccgccgacaaa
ccggccgccgaagccgctccagcaaagccgaaacctgaaggtagattgctgccgtgggat
caaccgcagtcagccgcaccgagcagtgcagagacgaaagccagcgaggacaaaccctca
cagtcttag
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