Woeseia oceani: BA177_13715
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Entry
BA177_13715 CDS
T04427
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
woc
Woeseia oceani
Pathway
woc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA177_13715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
woc03019
]
BA177_13715
03009 Ribosome biogenesis [BR:
woc03009
]
BA177_13715
Enzymes [BR:
woc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BA177_13715
Messenger RNA biogenesis [BR:
woc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA177_13715
Ribosome biogenesis [BR:
woc03009
]
Prokaryotic type
rRNA helicases
BA177_13715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
Cas3-like_C_2
SASH1_Homeodomain
UvrA_inter
Collagen
Motif
Other DBs
NCBI-ProteinID:
ANO52111
UniProt:
A0A193LHZ2
LinkDB
All DBs
Position
complement(3018367..3020334)
Genome browser
AA seq
655 aa
AA seq
DB search
MSEANQTPVTFRDLKLPAAIQAALDDVGYEMPSPIQAEAIPHLLAGLDLLGHAPTGTGKT
AAFALPLLSRIDPNSNSVQILTLTPTRELAIQVSEAFQRYAAHMGGFRVLPIYGGQEYSG
QLRQLKRGVTVVVGTPGRVMDHMRKGTLKLDKLQALVLDEADEMLRMGFIDDVEWILEQT
PTERQMALFSATMPREVERIARRHLRNPQEVSIKQRTATAETIRQRYWMVGGLHKLDALT
RILEVEPFDAILMFVRTKTATSELAERLEARGYAAAAMNGDMAQNQREQMVERLKKGSLD
ILVATDVAARGLDVDRISHVINYDIPYDTEAYIHRIGRTGRAGRQGDAILFVAPRERRML
YAIEKATRQKIERLDLPTTETVNNKRIADFKQKISDTLATGELGFMQGLIEQYQQEHDVP
ARDIAAALAQISLGDRPLLMKPETDRPATRAHDPDKRSSRDKSKRSKPRGPLGKDRELFR
IEVGYVHGVKPGNIVGAIANEAGLDGDNIGQIEIHDEHSILDLPVGMPADIFNDLKKARV
CGQAIRITRVGEAAAKASGKPGKARHFDKKPRSHKPDSKGSGPDKKRTKPKPGSKPAGAA
GSKPGKPGKFGKSAKPGKSGTFAKPGKPGKPAKSGKSGTLSKPAKPARGRGPADR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagccaatcaaacccccgtcacgtttcgtgacctgaaactgcctgctgcgatc
caggccgccctcgacgatgtgggctatgaaatgccatcgcccattcaggcggaagccatt
ccgcacttgctggccgggctcgacctgctgggtcacgcgccaaccggaacgggtaaaact
gccgcgttcgcactgccgctgttgtcgcgcatcgatccgaacagcaacagcgtgcaaata
ctgaccctgacgccaacccgtgagctggctatccaggtgtcggaagccttccaacgttac
gcggcgcacatgggcggttttcgcgtcctgcccatctacggtgggcaggaatacagcggg
cagctccgccagctcaagcgcggtgtcaccgtagttgtcggtacgccgggccgggtcatg
gatcacatgcgcaaaggcacgttgaaactcgacaagctgcaggcgctggtgctcgatgag
gcggatgaaatgctgcgtatgggtttcattgatgatgtggagtggatcctcgaacagacg
ccgacggaacggcaaatggcattgttttccgcgacgatgccgcgcgaagtggaacgcatc
gcacgacgccatttgcggaacccgcaggaagtgtcaatcaagcaacgcacggccacggcg
gaaacaatacgccagcggtactggatggtcggcggtttgcacaagctcgatgcgttgacc
cgcattctcgaagtggagccgttcgacgccattcttatgtttgtgcgcaccaagaccgcg
accagcgaactggccgagcggctggaagcgcgtggctatgccgccgcggcgatgaacggt
gacatggctcaaaaccaacgcgaacagatggtcgaacgtctcaaaaagggcagtctggac
atactcgtcgccaccgacgttgccgcacgtggtcttgacgttgatcgcatcagtcacgtg
atcaactacgacattccttacgataccgaagcctatattcaccggattgggcgcaccggc
cgtgccggtcggcagggcgatgcgatcctgttcgttgcgccgcgtgaacggcgcatgttg
tatgcgatcgagaaagcgacacggcaaaaaatcgagcggctggatctgccgacgaccgag
accgttaacaacaaacgcattgccgatttcaaacaaaagatcagcgacacgctggcaacc
ggtgaactgggcttcatgcaggggctgatagagcaataccagcaggagcacgatgtgccc
gcccgcgacattgcggccgcactggcgcagatctcgctcggtgatcgtcctttgctcatg
aagccggagaccgaccggccggcaacgcgtgcacacgatccggacaagcgcagcagccgg
gacaagtcgaaacgcagcaagccacgtggaccgctgggcaaggaccgggagctgtttcgt
atcgaagtcggctatgtgcacggcgtcaagccgggcaatatcgttggcgccattgccaat
gaggcagggcttgacggcgacaatatcggccagatcgaaatacacgacgagcacagtatc
ctggatctgccggtcggtatgcccgccgacatctttaacgacctgaagaaagcgcgggtg
tgcggccaggccatacgtattacgcgggtcggcgaagctgccgcgaaagcgtctggcaag
ccgggcaaagcgaggcacttcgacaagaagccacgcagccacaagccggatagcaagggc
agcggccccgacaagaagcggaccaagccgaagccaggcagcaagcccgccggagcggcc
ggcagtaagcccggaaaaccgggtaagtttggcaagtctgccaagcccggaaaatcgggc
acgtttgccaagccaggcaaaccaggcaagcccgctaaatccggcaagtccggcacactg
agcaagcccgccaagcccgcgcgtggacgtggacctgccgatcgctaa
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