Woeseia oceani: BA177_14065
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Entry
BA177_14065 CDS
T04427
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
woc
Woeseia oceani
Pathway
woc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BA177_14065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
woc02022
]
BA177_14065
02035 Bacterial motility proteins [BR:
woc02035
]
BA177_14065
Two-component system [BR:
woc02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BA177_14065
Bacterial motility proteins [BR:
woc02035
]
Pilus system
Twitching motility proteins
BA177_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_28
ATP-synt_ab
HTH_50
HTH_23
AAA
Motif
Other DBs
NCBI-ProteinID:
ANO52169
UniProt:
A0A193LIF0
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All DBs
Position
3110769..3112085
Genome browser
AA seq
438 aa
AA seq
DB search
MNRPLALVIDDEPDIRELLALTLGRMNIEAALAGDVAEAQAQLSEHNFDLCLTDMRLPDG
DGLDLVKWIQTNSPGVPVAVITAHGNVETAVQALKLGAFDFISKPLDLANLRNVIESALK
LGEPAPADDNRLLGNSTPMRELRELIERVARSQAPVHICGESGTGKELVARLIHDSGPRA
DGPFVPVNCGAIPADLMESEFFGHRKGAFTGAVADKAGLVQSANGGTLFLDEIADLPLSM
QVKLLRVIQEQTVRPVGAAAEEQVNIRILSATHRNLADMVANSDFREDLFYRINVIELRV
PPLRERGDDVLLLAENVMRRLGSSTEMLDAGARKLLCSYRFPGNVRELENMLERAVTLCV
NGSISSSDLHVRETPRADDALPAANSATSNLGGHIEDVERQAIVEALEKTRYNKTAAAKR
LGLSFRQLRYRIKKLGIE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccgttggccctggtaattgacgacgagcccgatattcgcgagctgctcgcg
ctgacgctcggccgtatgaatattgaggcagcgctcgcgggcgacgtcgctgaagcgcag
gcgcaactcagcgaacacaattttgatctttgcctgacagacatgcgcttgccggacggg
gatggactcgatctcgtcaagtggatacagaccaacagtccaggcgtacctgtcgccgtc
atcaccgcacacggcaatgtggaaacggcggtacaggcgctgaagctcggtgcgttcgac
ttcatctcgaaacccctcgatctcgccaatctgcgcaatgtcatcgaaagtgcgctgaaa
ctgggcgagccggcgccggcagacgacaatcgcctgttgggcaattccacacccatgcgg
gaactgcgggagttgattgagcgggtcgcgcgcagccaggcaccggtccacatctgcggc
gagtccggtaccggcaaggaactcgtggcaagactgatccatgactcggggccgcgtgcc
gatggacctttcgtgccggttaactgcggtgcaattcccgcggacctgatggagagtgag
ttctttggccaccgcaaaggcgccttcacaggcgcggtagcggacaaagcaggactggtg
caaagcgcgaatggcggtacgctgtttctcgatgaaatcgccgacctgccactgtccatg
caggtcaagctgctgcgcgtaatacaggaacaaacggtccgtccagttggcgcggcggct
gaggagcaggtcaatatccgtatcctgtccgcgactcacaggaacctcgccgacatggtg
gcgaacagcgacttccgcgaagacctgttttaccgaatcaatgtcattgaactgcgcgtc
ccgccgctgcgtgaacgcggcgacgatgtcctgttgcttgccgaaaacgtcatgcggcga
ctcggcagttcaacggaaatgctggatgcaggcgcccgcaagctgttatgcagctaccgt
tttcccggcaacgtgcgcgaactggaaaacatgctggagcgggcagttacgctgtgcgtc
aatggcagcatttcgagttccgacctgcacgtccgggaaactcctcgggcggacgatgca
ttgccagcggccaacagcgcgacgtccaatctcggtgggcatatcgaagatgttgagcgc
caggcgattgtcgaagcactcgaaaaaacccgctacaacaagacggcggcggcgaagcga
ctggggctgtcgtttcgccagttgcggtatcgcatcaagaaactcggtatcgagtag
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