Wolbachia endosymbiont of Drosophila melanogaster: WD_0929
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Entry
WD_0929 CDS
T00160
Name
(GenBank) ribonuclease, Rne/Rng family protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wol
Wolbachia endosymbiont of Drosophila melanogaster
Pathway
wol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WD_0929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wol03019
]
WD_0929
03009 Ribosome biogenesis [BR:
wol03009
]
WD_0929
Enzymes [BR:
wol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
WD_0929
Messenger RNA biogenesis [BR:
wol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WD_0929
Ribosome biogenesis [BR:
wol03009
]
Prokaryotic type
rRNA processing factors
WD_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AAS14600
UniProt:
Q73GL6
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All DBs
Position
complement(893623..895386)
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AA seq
587 aa
AA seq
DB search
MTNSGKRVLLIENSICSNEVRVALSINNKVVEFEQEFKEKKQLRGNIYVAYIKRIEPSLQ
AVFIEYGKNKQGFLSFSEISLDYFNIPEKEKETIFEGYSNDDCIEEASANVSSDSAASKN
VNGSGSGFVREVPLYKKYKLQDVISVNQKVLVQLTKEERGNKGASFTTYITLVGRYCVFM
PNSMSKGGVSRRIEDANVRKQLKEILSSINLPKRSGLIVRTVGSGKNKKEIEQDYNYLSS
LWQSIQKNAFSVNVPSLIYNEADVIMRSVRDFCSDGIEVIVSGKEAFEAVRQYANNALKG
SKLCYRLYRGYAPIFTYYGIEDQISELYSNRVELPSGGSLIITLTEAFVSIDVNSGKMTG
EDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIKQAFKDDK
AKVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGTGRVKSNEVIVSSILRDLQHIA
NKNRNKSFDLVAHSAVIAHIFNNKRNTVSTIEKEFNITLNVSIDNSLDVNTFVLKQGDDV
NLNGYKPLQNSGYQIGDSSNEEADNSNKLRGNFWLTKWLSRLLSSNN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaatagtggtaaaagggtattattgatagaaaattctatctgttctaatgaggta
agagttgccttgtcaattaataacaaggttgtagaatttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatataaagcgtatagagccttctttgcaa
gccgtatttattgaatatgggaaaaataagcaaggttttttgtctttttccgagatatct
ctagattacttcaacattccagaaaaagaaaaggaaactatctttgagggctactcaaat
gacgattgtatagaagaagcctcagcaaatgtttcttcagattctgcagctagtaagaat
gtcaacggatcaggtagtggttttgtaagagaggtacctttatataaaaaatacaaatta
caagatgttatttcagtaaatcaaaaagtattggtccagctaactaaagaggaacgaggc
aataaaggagcttcatttacaacatacataactttagtgggtagatactgtgttttcatg
ccaaattccatgagcaaaggtggagtgtcccgcagaattgaagatgctaatgtcagaaag
cagttaaaggagatactgagttcaataaacttgccaaaaagatcaggtttaatagtaaga
actgttggttcaggaaaaaataagaaagaaattgagcaggattacaattacttatcctca
ttatggcagagcattcaaaaaaatgccttctctgtaaacgttccatcattaatttacaat
gaagcagatgtaattatgagatctgttcgtgatttttgtagcgatggtatagaagttata
gtgtctggaaaggaagcttttgaggcagttaggcaatatgctaacaatgcactaaaaggt
agtaagttgtgctatagattgtatagaggttatgctccgatctttacttactacggaatc
gaagatcaaatttctgagttatatagcaatagagtagaattgccatctggtgggtctttg
ataataactttaactgaggcgtttgtttcaatagacgtaaattcaggaaagatgacagga
gaagatagcatagaagaaacagcttatagaaccaacatggaagcagtacctgaaatatca
agacaggtgaatcttaggggcctatcaggattaatagtagtcgattttattgatatgttg
aaatatcagtattgcagagctgttgagtctgctataaagcaagcgtttaaagatgataaa
gctaaagttcaatttagctacataaatgactttggtttaatggtattttcaaggcaaaga
attaaaccaaacatacaagaaattaatactacagagtgtttacactgcaaaggtactgga
agagtaaaatcaaacgaagtaattgtttcatcaatactaagggatttacaacatattgct
aacaagaatcgaaataagtcttttgatttagtagcacacagtgcagttatagcgcacatt
tttaataacaaacgcaatacagtttctacaatcgaaaaagagtttaatattacattgaac
gttagtattgataacagtttagatgtaaatacatttgttttaaaacaaggagatgatgtt
aatttaaacggttataagccattacagaactctggataccaaattggggatagcagcaat
gaagaagctgataattcaaataaactacgaggcaatttttggctgactaagtggctttcg
cgccttttaagttctaataactaa
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